Miyakogusa Predicted Gene

Lj1g3v3835720.1
Show Alignment:  
BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v3835720.1 Non Chatacterized Hit- tr|D7MJ07|D7MJ07_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,72.06,3e-16,DUF3339,Protein of unknown function
DUF3339,CUFF.31266.1
         (207 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC74110 weakly similar to UniRef100_A7P9W5 Cluster: Chr...   410   e-114

>gnl|LJGI|TC74110 weakly similar to UniRef100_A7P9W5 Cluster: Chromosome chr14
           scaffold_9, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr14 scaffold_9, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (74%)
          Length = 452

 Score =  410 bits (207), Expect = e-114
 Identities = 207/207 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaacgattgggctcctcctctcatagctgctgctctgttttggctattgagtccagga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56  atgaacgattgggctcctcctctcatagctgctgctctgttttggctattgagtccagga 115

                                                                       
Query: 61  atgatctttcagttgccggggaagaatgcgccattcgagtttatgaacatgaagactact 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 atgatctttcagttgccggggaagaatgcgccattcgagtttatgaacatgaagactact 175

                                                                       
Query: 121 gttgcatccatttttgtacacactgttatttatggtctctttctgatgttgttcttcatt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 gttgcatccatttttgtacacactgttatttatggtctctttctgatgttgttcttcatt 235

                                      
Query: 181 gttctctctgtccatgtttatatctag 207
           |||||||||||||||||||||||||||
Sbjct: 236 gttctctctgtccatgtttatatctag 262