Miyakogusa Predicted Gene
- Lj1g3v3834400.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3834400.1 Non Chatacterized Hit- tr|I1MLI6|I1MLI6_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,86.05,0,no
description,Chloride channel, core; CLCHANNEL,Chloride channel,
voltage gated;
CLCHANNELPLT,Chlor,NODE_28936_length_1641_cov_208.331512.path2.1
(1530 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AV408379 similar to UniRef100_Q0IJ86 Cluster: Chloride ... 722 0.0
gnl|LJGI|TC77751 similar to UniRef100_A7P9T0 Cluster: Chromosome... 640 0.0
gnl|LJGI|AV414753 similar to UniRef100_Q0IJ86 Cluster: Chloride ... 494 e-139
gnl|LJGI|AV406581 similar to UniRef100_Q0IJ86 Cluster: Chloride ... 204 1e-51
>gnl|LJGI|AV408379 similar to UniRef100_Q0IJ86 Cluster: Chloride channel; n=1; Glycine
max|Rep: Chloride channel - Glycine max (Soybean),
partial (14%)
Length = 407
Score = 722 bits (364), Expect = 0.0
Identities = 364/364 (100%)
Strand = Plus / Plus
Query: 68 taatagacccagaaggcaatccactaaatcagcctctactcatcaagaggaatcggacac 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44 taatagacccagaaggcaatccactaaatcagcctctactcatcaagaggaatcggacac 103
Query: 128 tgtcttccaatccacttgctctggtcggagcaaaagtttcctatatagaaagcttggact 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104 tgtcttccaatccacttgctctggtcggagcaaaagtttcctatatagaaagcttggact 163
Query: 188 atgagataaatgagaatgatctgttcaagcataattggagaagcagatcaagagttgaag 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 atgagataaatgagaatgatctgttcaagcataattggagaagcagatcaagagttgaag 223
Query: 248 tattgcagtacatattcttgaaatggaccctggcacttcttgttggacttctcactggta 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 tattgcagtacatattcttgaaatggaccctggcacttcttgttggacttctcactggta 283
Query: 308 ttatggccaccctcatcaatcttgctgttgagaacattgcaggatacaagcttctggctg 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 ttatggccaccctcatcaatcttgctgttgagaacattgcaggatacaagcttctggctg 343
Query: 368 ttcttagatacatccacacagaaaggtacttggcgggtttcctatatttcacgggcgtta 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 ttcttagatacatccacacagaaaggtacttggcgggtttcctatatttcacgggcgtta 403
Query: 428 attt 431
||||
Sbjct: 404 attt 407
>gnl|LJGI|TC77751 similar to UniRef100_A7P9T0 Cluster: Chromosome chr14 scaffold_9,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_9, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (21%)
Length = 832
Score = 640 bits (323), Expect = 0.0
Identities = 326/327 (99%)
Strand = Plus / Plus
Query: 68 taatagacccagaaggcaatccactaaatcagcctctactcatcaagaggaatcggacac 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 taatagacccagaaggcaatccactaaatcagcctctactcatcaagaggaatcggacac 253
Query: 128 tgtcttccaatccacttgctctggtcggagcaaaagtttcctatatagaaagcttggact 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 tgtcttccaatccacttgctctggtcggagcaaaagtttcctatatagaaagcttggact 313
Query: 188 atgagataaatgagaatgatctgttcaagcataattggagaagcagatcaagagttgaag 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 atgagataaatgagaatgatctgttcaagcataattggagaagcagatcaagagttgaag 373
Query: 248 tattgcagtacatattcttgaaatggaccctggcacttcttgttggacttctcactggta 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 tattgcagtacatattcttgaaatggaccctggcacttcttgttggacttctcactggta 433
Query: 308 ttatggccaccctcatcaatcttgctgttgagaacattgcaggatacaagcttctggctg 367
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 ttatagccaccctcatcaatcttgctgttgagaacattgcaggatacaagcttctggctg 493
Query: 368 ttcttagatacatccacacagaaaggt 394
|||||||||||||||||||||||||||
Sbjct: 494 ttcttagatacatccacacagaaaggt 520
Score = 353 bits (178), Expect = 2e-96
Identities = 178/178 (100%)
Strand = Plus / Plus
Query: 391 aggtacttggcgggtttcctatatttcacgggcgttaatttgttcttaacattgattgct 450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 aggtacttggcgggtttcctatatttcacgggcgttaatttgttcttaacattgattgct 714
Query: 451 gctgttctgtgtgtgtgttttgcacccacagcagctggaccgggaatacctgaaatcaaa 510
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 gctgttctgtgtgtgtgttttgcacccacagcagctggaccgggaatacctgaaatcaaa 774
Query: 511 gcttatcttaatggcattgatactcccaacatgtttggtgctacaacgttaatagtca 568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 gcttatcttaatggcattgatactcccaacatgtttggtgctacaacgttaatagtca 832
Score = 71.9 bits (36), Expect = 1e-11
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 1 atgggagaagaaagcttaacaatccataacaaaatg 36
||||||||||||||||||||||||||||||||||||
Sbjct: 127 atgggagaagaaagcttaacaatccataacaaaatg 162
>gnl|LJGI|AV414753 similar to UniRef100_Q0IJ86 Cluster: Chloride channel; n=1; Glycine
max|Rep: Chloride channel - Glycine max (Soybean),
partial (9%)
Length = 250
Score = 494 bits (249), Expect = e-139
Identities = 249/249 (100%)
Strand = Plus / Plus
Query: 1186 gcaaaatgtaccccttgtggctcactgcctccagattcagagtctgtctgccccaccaat 1245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gcaaaatgtaccccttgtggctcactgcctccagattcagagtctgtctgccccaccaat 61
Query: 1246 ggaaggtctggaaatttcaaacaattcaactgcccacctggccactacaacgatcttgcc 1305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ggaaggtctggaaatttcaaacaattcaactgcccacctggccactacaacgatcttgcc 121
Query: 1306 acccttctgcttacaactaatgacgatgctgttcgaaacatattctcaacaaacacttct 1365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 acccttctgcttacaactaatgacgatgctgttcgaaacatattctcaacaaacacttct 181
Query: 1366 caagaatatcaacccttctccctcctaattttctttgcactctattgcatattgggactc 1425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 caagaatatcaacccttctccctcctaattttctttgcactctattgcatattgggactc 241
Query: 1426 tttactttt 1434
|||||||||
Sbjct: 242 tttactttt 250
>gnl|LJGI|AV406581 similar to UniRef100_Q0IJ86 Cluster: Chloride channel; n=1; Glycine
max|Rep: Chloride channel - Glycine max (Soybean),
partial (5%)
Length = 184
Score = 204 bits (103), Expect = 1e-51
Identities = 136/147 (92%)
Strand = Plus / Plus
Query: 68 taatagacccagaaggcaatccactaaatcagcctctactcatcaagaggaatcggacac 127
||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 38 taatagacccagaaggcgatccagtaaatcagcctctactcatcaagaggaatcggacac 97
Query: 128 tgtcttccaatccacttgctctggtcggagcaaaagtttcctatatagaaagcttggact 187
||||||||||||||||||||||||| ||||||||||| | ||||||||||||||
Sbjct: 98 tgtcttccaatccacttgctctggtgggagcaaaagtgtggatggaagaaagcttggact 157
Query: 188 atgagataaatgagaatgatctgttca 214
|||||||||||||||||||||||||||
Sbjct: 158 atgagataaatgagaatgatctgttca 184