Miyakogusa Predicted Gene
- Lj1g3v3834340.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3834340.1 Non Chatacterized Hit- tr|J3MQ73|J3MQ73_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB08G1,46.88,2e-19,Cupredoxins,Cupredoxin; seg,NULL; no
description,Cupredoxin; Cu_bind_like,Plastocyanin-like;
PHYTOCY,CUFF.31245.1
(492 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO024675 similar to UniRef100_A7PLR0 Cluster: Chromosom... 940 0.0
gnl|LJGI|GO023233 similar to UniRef100_A7PLR0 Cluster: Chromosom... 242 2e-63
>gnl|LJGI|GO024675 similar to UniRef100_A7PLR0 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (67%)
Length = 658
Score = 940 bits (474), Expect = 0.0
Identities = 488/492 (99%), Gaps = 3/492 (0%)
Strand = Plus / Plus
Query: 1 atggggctcaagaacacaatctttttggcacttgttgtttctttgatcacaaaggaggcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 atggggctcaagaacacaatctttttggcacttgttgtttctttgatcacaaaggaggcc 137
Query: 61 ttggcagaacaacatgtagttggtggaagccaaggttgggatcaatccactgatttcaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 ttggcagaacaacatgtagttggtggaagccaaggttgggatcaatccactgatttcaac 197
Query: 121 tcttgggtttcaggcaaaacatttaatgttggcgatcaacttgttttcaagtactcttct 180
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 tcttgggtttcaggcaagacatttaatgttggcgatcaacttgttttcaagtactcttct 257
Query: 181 gggttgcatagtgtggttgaactaggcagcgagagtgactacaagaactgtgatattgga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 gggttgcatagtgtggttgaactaggcagcgagagtgactacaagaactgtgatattgga 317
Query: 241 agtgcagtcaacaccatgagtagcggcaatgatgcggtgaaactgagcaagcctggtaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 agtgcagtcaacaccatgagtagcggcaatgatgcggtgaaactgagcaagcctggtaca 377
Query: 301 cggtactttgcctgtggtacctcgggccactgcagtcaaggcatgaaggtgaagattaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 cggtactttgcctgtggtacctcgggccactgcagtcaaggcatgaaggtgaagattaca 437
Query: 361 acagggaaagggaatgcaccttcatcttcttctactactactacttctgcagcttcaacc 420
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 438 acagggaaagggaatgcaccttcatcttctt---ctactactacttctgcagcttcaacc 494
Query: 421 tcacaaggcttcatctctcttgtgctcattgctactgcattgttgattgcttctctgctt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 tcacaaggcttcatctctcttgtgctcattgctactgcattgttgattgcttctctgctt 554
Query: 481 ccccagttttga 492
||||||||||||
Sbjct: 555 ccccagttttga 566
>gnl|LJGI|GO023233 similar to UniRef100_A7PLR0 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (54%)
Length = 494
Score = 242 bits (122), Expect = 2e-63
Identities = 316/380 (83%), Gaps = 3/380 (0%)
Strand = Plus / Plus
Query: 10 aagaacacaatctttttggcacttgttgtttctttgatcacaaaggaggccttggcagaa 69
||||||||| | || |||| ||| || ||| | ||||||||||||||||||||||||| |
Sbjct: 64 aagaacacatttttcttggtactggtagttaccttgatcacaaaggaggccttggcagca 123
Query: 70 caacatgtagttggtggaagccaaggttgggatcaatccactgatttcaactcttgggtt 129
||||| | ||||||||||||||||| ||||||| ||||| || || || || ||||||
Sbjct: 124 aaacatcttgttggtggaagccaaggctgggatccttccacagactttaattcatgggtt 183
Query: 130 tcaggcaaaacatttaatgttggcgatcaacttgttttcaagtactcttctgggttgcat 189
|||||| ||||||| || ||||| ||||||||||||||||||||||||||| ||||||
Sbjct: 184 tcaggccaaacattcaaggttggggatcaacttgttttcaagtactcttct---ttgcat 240
Query: 190 agtgtggttgaactaggcagcgagagtgactacaagaactgtgatattggaagtgcagtc 249
|||||||||||||| || |||||||| | ||||||||| ||||||||| | | ||||
Sbjct: 241 agtgtggttgaactgggaagcgagagcgcctacaagaattgtgatattagcaacatagtc 300
Query: 250 aacaccatgagtagcggcaatgatgcggtgaaactgagcaagcctggtacacggtacttt 309
|| || |||| || ||||| |||| || ||| || ||| |||||||| |||||||
Sbjct: 301 aagtccttgagcagtggcaacgatgttgtcaaattggacaaacctggtacgaggtacttc 360
Query: 310 gcctgtggtacctcgggccactgcagtcaaggcatgaaggtgaagattacaacagggaaa 369
| ||||||||||| ||||| || ||||||||||||||||||||||||||| ||| |||
Sbjct: 361 acttgtggtacctcaggccattgtggtcaaggcatgaaggtgaagattacaataggaaaa 420
Query: 370 gggaatgcaccttcatcttc 389
|||||||||| ||| |||||
Sbjct: 421 gggaatgcactttcttcttc 440