Miyakogusa Predicted Gene
- Lj1g3v3834300.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3834300.1 Non Chatacterized Hit- tr|I1N256|I1N256_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,30.99,2e-18,RNI-like,NULL; no description,NULL; FAMILY NOT
NAMED,NULL; FBD,FBD; domain in FBox and BRCT domain c,CUFF.31239.1
(1059 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP045368 151 1e-35
gnl|LJGI|TC69530 96 5e-19
gnl|LJGI|FS330951 similar to UniRef100_A7QK65 Cluster: Chromosom... 76 5e-13
gnl|LJGI|TC64591 weakly similar to UniRef100_Q2HUI7 Cluster: Cyc... 66 5e-10
gnl|LJGI|FS343807 64 2e-09
gnl|LJGI|AV775007 62 7e-09
gnl|LJGI|TC68402 weakly similar to UniRef100_Q8LF09 Cluster: F-b... 54 2e-06
gnl|LJGI|BP083641 UniRef100_A3N1N8 Cluster: Maltose transport sy... 52 7e-06
>gnl|LJGI|BP045368
Length = 290
Score = 151 bits (76), Expect = 1e-35
Identities = 132/151 (87%)
Strand = Plus / Minus
Query: 875 agatgacatttgccaagtttattatgcaaaattcaacattgttacgtaccatgaaaattt 934
|||||| |||||| || || |||||| ||||||||||||||||| ||||||||||||||
Sbjct: 274 agatgagatttgctgagcttgttatgcnaaattcaacattgttacataccatgaaaattt 215
Query: 935 ccagtaaccgttacctatctcatgagaaaaatcttgaaatgagaaaagaattgaactcat 994
|||||||| || ||||||||||||||||| ||||||||||| |||||||||| ||||||
Sbjct: 214 tcagtaaccctttcctatctcatgagaaaattcttgaaatgaaaaaagaattggactcat 155
Query: 995 gcccaaggagctctgcatcatgtgaactttt 1025
|| || |||||||| ||| |||||| ||||
Sbjct: 154 gcacatggagctctatatcctgtgaaatttt 124
>gnl|LJGI|TC69530
Length = 553
Score = 95.6 bits (48), Expect = 5e-19
Identities = 290/370 (78%), Gaps = 3/370 (0%)
Strand = Plus / Plus
Query: 642 agacattcctatatttcccaatttaattcatctggatctcatctttagacgcaatcttaa 701
||||||||||||||||||||||||||||||| |||| |||| ||| || || ||||
Sbjct: 85 agacattcctatatttcccaatttaattcatatggagctcaccttgggaggccggattaa 144
Query: 702 atgggaatcggtgtttgatatgctcaatcattgccctcaacttcaaatttttgtccttca 761
| ||||||| || || || | |||||||||||||||| |||||||| ||||| | |
Sbjct: 145 aatggaatcgttgctttatttcctcaatcattgccctcgacttcaaaaccttgtcatgga 204
Query: 762 caacttatatcgtactccttctatggtttggccaaatacacatgttattcctgaatgctt 821
||| ||| | || | ||||| | |||||||||||||| |||| | |||| |||||
Sbjct: 205 aaacctattttctattgattctaggaattggccaaatacacttgttgcttctgagtgctt 264
Query: 822 ttcttcacagctcaggacatgctggcttactgagcttacaggcacaaaatgtgagatgac 881
||||||||||||| | || |||| ||| | | |||||||| | | |||| | |
Sbjct: 265 ttcttcacagctccgaacctgctttcttccatgtttcacaggcaccgattctgagctaag 324
Query: 882 atttgccaagtttattatgcaaaattcaacattgttacgtaccatgaaaatttccagtaa 941
|||| |||||||| |||||||||| |||||||||||| ||| |||||||||| | |
Sbjct: 325 attttccaagtttgttatgcaaaactcaacattgttaggtagcatgaaaattatcgg--- 381
Query: 942 ccgttacctatctcatgagaaaaatcttgaaatgagaaaagaattgaactcatgcccaag 1001
|| || |||||||||||||||||| | | ||||||| |||||| |||||||||||||
Sbjct: 382 ccattccctatctcatgagaaaaaggctaagatgagaatagaattagactcatgcccaag 441
Query: 1002 gagctctgca 1011
||||||||||
Sbjct: 442 gagctctgca 451
>gnl|LJGI|FS330951 similar to UniRef100_A7QK65 Cluster: Chromosome chr19 scaffold_111,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_111, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 812
Score = 75.8 bits (38), Expect = 5e-13
Identities = 98/118 (83%)
Strand = Plus / Plus
Query: 2 tgataggattagcaatttatcagatgatcttctccgtcacattctctcgttccttcctac 61
||||||||||||||| || ||||||| ||||| ||||||||||||| || ||||| ||
Sbjct: 5 tgataggattagcaagttgccagatgaagttctctgtcacattctctcatttcttcccac 64
Query: 62 tgaagatgcttttgcgacaagtcttgtgtccaagagatggagaccactctggctttca 119
|||||| ||| | | || | |||| | || |||||||||||||||||||||| ||||
Sbjct: 65 tgaagaagctgtcaccaccattcttctctcaaagagatggagaccactctggccttca 122
>gnl|LJGI|TC64591 weakly similar to UniRef100_Q2HUI7 Cluster: Cyclin-like F-box; FBD;
Zinc finger, FYVE/PHD-type; n=1; Medicago
truncatula|Rep: Cyclin-like F-box; FBD; Zinc finger,
FYVE/PHD-type - Medicago truncatula (Barrel medic),
partial (19%)
Length = 1534
Score = 65.9 bits (33), Expect = 5e-10
Identities = 69/81 (85%)
Strand = Plus / Plus
Query: 41 cattctctcgttccttcctactgaagatgcttttgcgacaagtcttgtgtccaagagatg 100
||||||||| || ||||| |||||||| ||| |||| || | | || | |||||||||||
Sbjct: 311 cattctctcatttcttccgactgaagacgctgttgccaccattgttctctccaagagatg 370
Query: 101 gagaccactctggctttcagt 121
|||||||||||||| ||||||
Sbjct: 371 gagaccactctggccttcagt 391
Score = 56.0 bits (28), Expect = 5e-07
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 870 atgtgagatgacatttgccaagtttattatgcaaaattcaacattgttacgtaccatgaa 929
||||||||||| |||||| | || | |||||||||| ||||||| |||||||||||||
Sbjct: 1205 atgtgagatgagatttgcaaggtatgttatgcaaaactcaacatccttacgtaccatgac 1264
Query: 930 aatt 933
||||
Sbjct: 1265 aatt 1268
>gnl|LJGI|FS343807
Length = 619
Score = 63.9 bits (32), Expect = 2e-09
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 634 tgcgatgtagacattcctatatttcccaatttaattcatctgga 677
|||||||| ||||||||||| ||||||||||||||| |||||||
Sbjct: 40 tgcgatgtggacattcctatgtttcccaatttaatttatctgga 83
>gnl|LJGI|AV775007
Length = 469
Score = 61.9 bits (31), Expect = 7e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 346 tttaaggatttttcatctgttcaacttccctcactcaaagctctgcatttg 396
|||||||||||||| |||| ||||||||||||||| |||||||||||||
Sbjct: 443 tttaaggatttttctagtgttgaacttccctcactcacagctctgcatttg 393
>gnl|LJGI|TC68402 weakly similar to UniRef100_Q8LF09 Cluster: F-box/FBD/LRR-repeat
protein At4g00160; n=2; Arabidopsis thaliana|Rep:
F-box/FBD/LRR-repeat protein At4g00160 - Arabidopsis
thaliana (Mouse-ear cress), partial (13%)
Length = 773
Score = 54.0 bits (27), Expect = 2e-06
Identities = 96/119 (80%)
Strand = Plus / Plus
Query: 3 gataggattagcaatttatcagatgatcttctccgtcacattctctcgttccttcctact 62
|||||||| ||||| || ||||||| |||| |||| |||||||| || ||||| ||
Sbjct: 50 gataggataagcaagttgccagatgaagttctgtgtcaaattctctcatttcttcccacg 109
Query: 63 gaagatgcttttgcgacaagtcttgtgtccaagagatggagaccactctggctttcagt 121
||||||||| |||| |||||| || | | |||||| ||||| | ||||||||||||||
Sbjct: 110 gaagatgctgttgccacaagtgttctctgcaagaggtggagttccctctggctttcagt 168
>gnl|LJGI|BP083641 UniRef100_A3N1N8 Cluster: Maltose transport system permease protein
MalF; n=1; Actinobacillus pleuropneumoniae L20|, partial
(2%)
Length = 336
Score = 52.0 bits (26), Expect = 7e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 968 ttgaaatgagaaaagaattgaactcatgcccaaggagctctgcatcatgtgaactttt 1025
|||||||| |||||||||| |||||||||||| || |||||| ||||||||||||
Sbjct: 298 ttgaaatgctaaaagaattgtcctcatgcccaagaagttctgcaatatgtgaactttt 241