Miyakogusa Predicted Gene

Lj1g3v3834280.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v3834280.1 Non Chatacterized Hit- tr|A5AQV3|A5AQV3_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,56.19,7e-18,
,CUFF.31246.1
         (294 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC60376                                                      569   e-162
gnl|LJGI|TC62008                                                       98   4e-20

>gnl|LJGI|TC60376 
          Length = 1157

 Score =  569 bits (287), Expect = e-162
 Identities = 294/295 (99%), Gaps = 1/295 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggttcatgttcttccgttcacagaaaccaagaaaccaacatgaagcatctgggtctt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atgggttcatgttcttccgttcacagaaaccaagaaaccaacatgaagcatctgggtctt 324

                                                                       
Query: 61  tcattttgttccaaaactgacaagcttgtgattcctccaacacccatcaaagaaaaaccc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tcattttgttccaaaactgacaagcttgtgattcctccaacacccatcaaagaaaaaccc 384

                                                                       
Query: 121 aaaaatggaaactttctcaactctcagtcgccaccttctcggtcaaccaccatcatcaat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aaaaatggaaactttctcaactctcagtcgccaccttctcggtcaaccaccatcatcaat 444

                                                                       
Query: 181 ggtagcaaagaggaagtg-ttttttgagtccaaggtctggttagactcggattgtgatga 239
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ggtagcaaagaggaagtgtttttttgagtccaaggtctggttagactcggattgtgatga 504

                                                                  
Query: 240 tgatttctatagtgtcaatggtgagtttacgccatctcgtggctccactccagtg 294
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tgatttctatagtgtcaatggtgagtttacgccatctcgtggctccactccagtg 559


>gnl|LJGI|TC62008 
          Length = 1288

 Score = 97.6 bits (49), Expect = 4e-20
 Identities = 88/101 (87%)
 Strand = Plus / Plus

                                                                       
Query: 181 ggtagcaaagaggaagtgttttttgagtccaaggtctggttagactcggattgtgatgat 240
           ||||||||||||||||  |||||||| |||||   |||||| ||||| |||||||| || 
Sbjct: 440 ggtagcaaagaggaagcattttttgattccaaaccctggttggactcagattgtgaagac 499

                                                    
Query: 241 gatttctatagtgtcaatggtgagtttacgccatctcgtgg 281
           ||||||||||||||||||||||| ||||| || ||||||||
Sbjct: 500 gatttctatagtgtcaatggtgactttacaccgtctcgtgg 540