Miyakogusa Predicted Gene
- Lj1g3v3751710.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3751710.1 Non Chatacterized Hit- tr|F6GX63|F6GX63_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,84,8e-17,seg,NULL; Fer2_3,Succinate dehydogenase/fumarate
reductase N-terminal; Fer4_8,4Fe-4S ferredoxin-type,CUFF.31148.1
(837 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61712 similar to UniRef100_Q8LB02 Cluster: Succinate ... 1651 0.0
gnl|LJGI|TC71400 homologue to UniRef100_Q8LB02 Cluster: Succinat... 904 0.0
gnl|LJGI|BW606574 similar to UniRef100_Q198M7 Cluster: Succinate... 464 e-130
gnl|LJGI|TC80760 similar to UniRef100_Q834J9 Cluster: Abortive i... 60 2e-08
>gnl|LJGI|TC61712 similar to UniRef100_Q8LB02 Cluster: Succinate dehydrogenase
[ubiquinone] iron-sulfur subunit 2, mitochondrial
precursor; n=1; Arabidopsis thaliana|Rep: Succinate
dehydrogenase [ubiquinone] iron-sulfur subunit 2,
mitochondrial precursor - Arabidopsis thaliana
(Mouse-ear cress), partial (81%)
Length = 1119
Score = 1651 bits (833), Expect = 0.0
Identities = 836/837 (99%)
Strand = Plus / Plus
Query: 1 atgctgaagaaagcgttgtctaaggttcctccctccccggcatcatcaccgccgtggagg 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 117 atgctgaagaaagcgttgtctaaggttcctccctcaccggcatcatcaccgccgtggagg 176
Query: 61 ctcgctctcctccgtgcccacgcgtcggagacccaagcccagcaggtggaacccaaagcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 ctcgctctcctccgtgcccacgcgtcggagacccaagcccagcaggtggaacccaaagcc 236
Query: 121 agtgagacaacccggatgaagaagttccaaatctaccgatggaaccctgagaatccgacg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 agtgagacaacccggatgaagaagttccaaatctaccgatggaaccctgagaatccgacg 296
Query: 181 aagccggagctgaaggaatacaccatcaacctcaaggattgcggccctatggtcctcgac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 aagccggagctgaaggaatacaccatcaacctcaaggattgcggccctatggtcctcgac 356
Query: 241 gctctcatcaagatcaagaatgaggtcgatcagaccctcaccttccgccgttcctgcagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 gctctcatcaagatcaagaatgaggtcgatcagaccctcaccttccgccgttcctgcagg 416
Query: 301 gaaggcatctgtggctcatgcgcgatgaacatcgacggttgcaacgggcttgcttgcctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 gaaggcatctgtggctcatgcgcgatgaacatcgacggttgcaacgggcttgcttgcctg 476
Query: 361 acggagattccgtcggaggcgaaggagacgacggtgacgccgctgcctcatatgtttgtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 acggagattccgtcggaggcgaaggagacgacggtgacgccgctgcctcatatgtttgtg 536
Query: 421 attaaggatttggtggtggatatgacgaatttctatcagcagtataagagtattgagccg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 attaaggatttggtggtggatatgacgaatttctatcagcagtataagagtattgagccg 596
Query: 481 tggttgaagaggaagagtccgccgcctgttccagggaaggagattctgcagagcaagaag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 tggttgaagaggaagagtccgccgcctgttccagggaaggagattctgcagagcaagaag 656
Query: 541 gatcgggaaaagttggatgggatgtatgagtgtattctgtgcgcttgttgcagtacttct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 gatcgggaaaagttggatgggatgtatgagtgtattctgtgcgcttgttgcagtacttct 716
Query: 601 tgccctagttattggtggaaccctgaatcttatcttggtcctgctgctttgctccacgct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 tgccctagttattggtggaaccctgaatcttatcttggtcctgctgctttgctccacgct 776
Query: 661 aataggtggataagcgacagtcgtgatgagtacacaaaggagaggctggaggccattaac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 777 aataggtggataagcgacagtcgtgatgagtacacaaaggagaggctggaggccattaac 836
Query: 721 gatgaattcaagctctatcgctgccacagcatattgaactgtgccgatgcctgccctaag 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 837 gatgaattcaagctctatcgctgccacagcatattgaactgtgccgatgcctgccctaag 896
Query: 781 ttgttgaaccctgggaagcaaatccaacagatcaagtcagctcagccaaaagcttga 837
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 897 ttgttgaaccctgggaagcaaatccaacagatcaagtcagctcagccaaaagcttga 953
>gnl|LJGI|TC71400 homologue to UniRef100_Q8LB02 Cluster: Succinate dehydrogenase
[ubiquinone] iron-sulfur subunit 2, mitochondrial
precursor; n=1; Arabidopsis thaliana|Rep: Succinate
dehydrogenase [ubiquinone] iron-sulfur subunit 2,
mitochondrial precursor - Arabidopsis thaliana
(Mouse-ear cress), partial (59%)
Length = 826
Score = 904 bits (456), Expect = 0.0
Identities = 501/516 (97%)
Strand = Plus / Plus
Query: 322 gcgatgaacatcgacggttgcaacgggcttgcttgcctgacggagattccgtcggaggcg 381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcgatgaacatcgacggttgcaacgggcttgcttgcctgacggagattccgtcggaggcg 60
Query: 382 aaggagacgacggtgacgccgctgcctcatatgtttgtgattaaggatttggtggtggat 441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaggagacgacggtgacgccgctgcctcatatgtttgtgattaaggatttggtggtggat 120
Query: 442 atgacgaatttctatcagcagtataagagtattgagccgtggttgaagaggaagagtccg 501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atgacgaatttctatcagcagtataagagtattgagccgtggttgaagaggaagagtccg 180
Query: 502 ccgcctgttccagggaaggagattctgcagagcaagaaggatcgggaaaagttggatggg 561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ccgcctgttccagggaaggagattctgcagagcaagaaggatcgggaaaagttggatggg 240
Query: 562 atgtatgagtgtattctgtgcgcttgttgcagtacttcttgccctagttattggtggaac 621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atgtatgagtgtattctgtgcgcttgttgcagtacttcttgccctagttattggtggaac 300
Query: 622 cctgaatcttatcttggtcctgctgctttgctccacgctaataggtggataagcgacagt 681
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cctgaatcttatcttggtcctgctgctttgctccacgctaataggtggataagcgacagt 360
Query: 682 cgtgatgagtacacaaaggagaggctggaggccattaacgatgaattcaagctctatcgc 741
|||||||||||||| |||||||| ||||||||||| | ||||| ||||||||||||||
Sbjct: 361 cgtgatgagtacaccaaggagagattggaggccattgatgatgagttcaagctctatcgg 420
Query: 742 tgccacagcatattgaactgtgccgatgcctgccctaagttgttgaaccctgggaagcaa 801
||||||| ||||||||||||||| ||||||||| ||| |||||||||||| ||||||
Sbjct: 421 tgccacaccatattgaactgtgctcgtgcctgcccaaaggggttgaaccctggaaagcaa 480
Query: 802 atccaacagatcaagtcagctcagccaaaagcttga 837
||||||||||||||||||||||||||||||||||||
Sbjct: 481 atccaacagatcaagtcagctcagccaaaagcttga 516
>gnl|LJGI|BW606574 similar to UniRef100_Q198M7 Cluster: Succinate dehydrogenase; n=1;
Mangifera indica|Rep: Succinate dehydrogenase -
Mangifera indica (Mango), partial (35%)
Length = 469
Score = 464 bits (234), Expect = e-130
Identities = 240/242 (99%)
Strand = Plus / Plus
Query: 1 atgctgaagaaagcgttgtctaaggttcctccctccccggcatcatcaccgccgtggagg 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 228 atgctgaagaaagcgttgtctaaggttcctccctcaccggcatcatcaccgccatggagg 287
Query: 61 ctcgctctcctccgtgcccacgcgtcggagacccaagcccagcaggtggaacccaaagcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 ctcgctctcctccgtgcccacgcgtcggagacccaagcccagcaggtggaacccaaagcc 347
Query: 121 agtgagacaacccggatgaagaagttccaaatctaccgatggaaccctgagaatccgacg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 agtgagacaacccggatgaagaagttccaaatctaccgatggaaccctgagaatccgacg 407
Query: 181 aagccggagctgaaggaatacaccatcaacctcaaggattgcggccctatggtcctcgac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 aagccggagctgaaggaatacaccatcaacctcaaggattgcggccctatggtcctcgac 467
Query: 241 gc 242
||
Sbjct: 468 gc 469
>gnl|LJGI|TC80760 similar to UniRef100_Q834J9 Cluster: Abortive infection protein;
n=1; Enterococcus faecalis|Rep: Abortive infection
protein - Enterococcus faecalis (Streptococcus
faecalis), partial (7%)
Length = 416
Score = 60.0 bits (30), Expect = 2e-08
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 808 cagatcaagtcagctcagccaaaagcttga 837
||||||||||||||||||||||||||||||
Sbjct: 416 cagatcaagtcagctcagccaaaagcttga 387