Miyakogusa Predicted Gene
- Lj1g3v3740540.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3740540.2 Non Chatacterized Hit- tr|K3YMG1|K3YMG1_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si015440,67.74,0.025,seg,NULL; FAMILY NOT NAMED,NULL,CUFF.31134.2
(783 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59497 similar to UniRef100_Q2HU72 Cluster: Steroid nu... 1513 0.0
gnl|LJGI|TC58025 weakly similar to UniRef100_Q2HU72 Cluster: Ste... 803 0.0
gnl|LJGI|FS322122 similar to UniRef100_Q2HU72 Cluster: Steroid n... 670 0.0
>gnl|LJGI|TC59497 similar to UniRef100_Q2HU72 Cluster: Steroid nuclear receptor,
ligand-binding; n=1; Medicago truncatula|Rep: Steroid
nuclear receptor, ligand-binding - Medicago truncatula
(Barrel medic), partial (70%)
Length = 1562
Score = 1513 bits (763), Expect = 0.0
Identities = 778/783 (99%)
Strand = Plus / Plus
Query: 1 atggaacctcctacgggattttgtgcttccttgtcgagcttcattcgatttcttcctttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 atggaacctcctacgggattttgtgcttccttgtcgagcttcattcgatttcttcctttc 303
Query: 61 ttcattgggcttctgcttcttggcaacatcaaaggtgtcattttcttcccattgacatgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 ttcattgggcttctgcttcttggcaacatcaaaggtgtcattttcttcccattgacatgc 363
Query: 121 ttaataataacaattggcaactctgctatcatacttggactttggcctgcacatgttgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 ttaataataacaattggcaactctgctatcatacttggactttggcctgcacatgttgtt 423
Query: 181 tggacatattactgcgttgtgagagctaagcacatagggccttttctgaagcttattatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 tggacatattactgcgttgtgagagctaagcacatagggccttttctgaagcttattatc 483
Query: 241 tgcacatgtgtactaccagtgctgttgatttcatggccgctgggtggtattcttggaagc 300
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 484 tgcacatgtgtactaccagtgctgttgatttcatggccgctggttggtattcttggaagc 543
Query: 301 attgtaggtggagccgccttgggatatctttcaccaatatttgcaacttttgaagctgta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 attgtaggtggagccgccttgggatatctttcaccaatatttgcaacttttgaagctgta 603
Query: 361 gaggaaggaaaagatgataagctcttccactgtttcattgatggtacgtggagcacttta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 gaggaaggaaaagatgataagctcttccactgtttcattgatggtacgtggagcacttta 663
Query: 421 gaaaggagctgcatggttgttagggatgtaagagatgtttgtttctattcctacttttca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 gaaaggagctgcatggttgttagggatgtaagagatgtttgtttctattcctacttttca 723
Query: 481 gttatggatgacctacgagaaaagggacctccaaatagaaaatactatgagatcaggctg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 gttatggatgacctacgagaaaagggacctccaaatagaaaatactatgagatcaggctg 783
Query: 541 cattatcttcctggtgctttaatggctacagttatcggaatcatagttgatgtgccggtt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 cattatcttcctggtgctttaatggctacagttatcggaatcatagttgatgtgccggtt 843
Query: 601 atttcatttattgccctatgcaaaggcccttacatgcttttcaaagggtggcaccggttg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 844 atttcatttattgccctatgcaaaggcccttacatgcttttcaaagggtggcaccggttg 903
Query: 661 tttcatgacctcattggcagtgaaggcccgttcttggagacaatatgtgtacctttggca 720
|||||||||||||||||| |||||||||| |||||||||||||||||||||||||| |||
Sbjct: 904 tttcatgacctcattggccgtgaaggccctttcttggagacaatatgtgtaccttttgca 963
Query: 721 ggtcttgccatccttctgtggccactggctgttactggggcagttttggcatccatgtaa 780
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 964 ggtcttgccatccttctgtggccactggctgttactggggcagttttggcatccatgtta 1023
Query: 781 gca 783
|||
Sbjct: 1024 gca 1026
>gnl|LJGI|TC58025 weakly similar to UniRef100_Q2HU72 Cluster: Steroid nuclear
receptor, ligand-binding; n=1; Medicago truncatula|Rep:
Steroid nuclear receptor, ligand-binding - Medicago
truncatula (Barrel medic), partial (23%)
Length = 922
Score = 803 bits (405), Expect = 0.0
Identities = 408/409 (99%)
Strand = Plus / Plus
Query: 1 atggaacctcctacgggattttgtgcttccttgtcgagcttcattcgatttcttcctttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 atggaacctcctacgggattttgtgcttccttgtcgagcttcattcgatttcttcctttc 573
Query: 61 ttcattgggcttctgcttcttggcaacatcaaaggtgtcattttcttcccattgacatgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 ttcattgggcttctgcttcttggcaacatcaaaggtgtcattttcttcccattgacatgc 633
Query: 121 ttaataataacaattggcaactctgctatcatacttggactttggcctgcacatgttgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 ttaataataacaattggcaactctgctatcatacttggactttggcctgcacatgttgtt 693
Query: 181 tggacatattactgcgttgtgagagctaagcacatagggccttttctgaagcttattatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 tggacatattactgcgttgtgagagctaagcacatagggccttttctgaagcttattatc 753
Query: 241 tgcacatgtgtactaccagtgctgttgatttcatggccgctgggtggtattcttggaagc 300
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 754 tgcacatgtgtactaccagtgctgttgatttcatggccgctggttggtattcttggaagc 813
Query: 301 attgtaggtggagccgccttgggatatctttcaccaatatttgcaacttttgaagctgta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 814 attgtaggtggagccgccttgggatatctttcaccaatatttgcaacttttgaagctgta 873
Query: 361 gaggaaggaaaagatgataagctcttccactgtttcattgatggtacgt 409
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 874 gaggaaggaaaagatgataagctcttccactgtttcattgatggtacgt 922
>gnl|LJGI|FS322122 similar to UniRef100_Q2HU72 Cluster: Steroid nuclear receptor,
ligand-binding; n=1; Medicago truncatula|Rep: Steroid
nuclear receptor, ligand-binding - Medicago truncatula
(Barrel medic), partial (20%)
Length = 622
Score = 670 bits (338), Expect = 0.0
Identities = 341/342 (99%)
Strand = Plus / Plus
Query: 1 atggaacctcctacgggattttgtgcttccttgtcgagcttcattcgatttcttcctttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 atggaacctcctacgggattttgtgcttccttgtcgagcttcattcgatttcttcctttc 340
Query: 61 ttcattgggcttctgcttcttggcaacatcaaaggtgtcattttcttcccattgacatgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 ttcattgggcttctgcttcttggcaacatcaaaggtgtcattttcttcccattgacatgc 400
Query: 121 ttaataataacaattggcaactctgctatcatacttggactttggcctgcacatgttgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 ttaataataacaattggcaactctgctatcatacttggactttggcctgcacatgttgtt 460
Query: 181 tggacatattactgcgttgtgagagctaagcacatagggccttttctgaagcttattatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 tggacatattactgcgttgtgagagctaagcacatagggccttttctgaagcttattatc 520
Query: 241 tgcacatgtgtactaccagtgctgttgatttcatggccgctgggtggtattcttggaagc 300
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 521 tgcacatgtgtactaccagtgctgttgatttcatggccgctggttggtattcttggaagc 580
Query: 301 attgtaggtggagccgccttgggatatctttcaccaatattt 342
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 attgtaggtggagccgccttgggatatctttcaccaatattt 622