Miyakogusa Predicted Gene

Lj1g3v3705150.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v3705150.1 NODE_66321_length_332_cov_27.831326.path1.1
         (115 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW600331 similar to UniRef100_Q4RBB3 Cluster: Chromosom...   186   2e-47
gnl|LJGI|TC74815                                                      186   2e-47
gnl|LJGI|BP067852                                                     165   7e-41

>gnl|LJGI|BW600331 similar to UniRef100_Q4RBB3 Cluster: Chromosome undetermined
           SCAF21804, whole genome shotgun sequence; n=1; Tetraodon
           nigroviridis|Rep: Chromosome undetermined SCAF21804,
           whole genome shotgun sequence - Tetraodon nigroviridis
           (Green puffer), partial (31%)
          Length = 448

 Score =  186 bits (94), Expect = 2e-47
 Identities = 108/115 (93%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtccttcagatggcgtagtcgaatattttctttagtacatgtccttttttcgatttcg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 atgtccttcagatggcgtagtcgaatattttctttagtacatgtccttttttcgatttcg 291

                                                                  
Query: 61  tgttgtcaagtgttatcaagttgtgccnnnnnnncctgttattatgtcctttaaa 115
           |||||||||||||||||||||||||||       |||||||||||||||||||||
Sbjct: 292 tgttgtcaagtgttatcaagttgtgccaaaaaaacctgttattatgtcctttaaa 346


>gnl|LJGI|TC74815 
          Length = 684

 Score =  186 bits (94), Expect = 2e-47
 Identities = 108/115 (93%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtccttcagatggcgtagtcgaatattttctttagtacatgtccttttttcgatttcg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 atgtccttcagatggcgtagtcgaatattttctttagtacatgtccttttttcgatttcg 482

                                                                  
Query: 61  tgttgtcaagtgttatcaagttgtgccnnnnnnncctgttattatgtcctttaaa 115
           |||||||||||||||||||||||||||       |||||||||||||||||||||
Sbjct: 483 tgttgtcaagtgttatcaagttgtgccaaaaaaacctgttattatgtcctttaaa 537


>gnl|LJGI|BP067852 
          Length = 457

 Score =  165 bits (83), Expect = 7e-41
 Identities = 86/87 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgtccttcagatggcgtagtcgaatattttctttagtacatgtccttttttcgatttcg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 133 atgtccttcagatggcgtagtcgaatattttctttagtacatgtccttttttctatttcg 74

                                      
Query: 61  tgttgtcaagtgttatcaagttgtgcc 87
           |||||||||||||||||||||||||||
Sbjct: 73  tgttgtcaagtgttatcaagttgtgcc 47