Miyakogusa Predicted Gene
- Lj1g3v3689920.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3689920.1 Non Chatacterized Hit- tr|F6HRK7|F6HRK7_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,70.55,0,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
DUF707,Protein of unknown function DUF707,gene.g35180.t1.1
(441 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS358425 similar to UniRef100_A7P4A9 Cluster: Chromosom... 668 0.0
gnl|LJGI|FS353428 similar to UniRef100_Q9LN04 Cluster: T6D22.12;... 186 8e-47
gnl|LJGI|BW600329 similar to UniRef100_A7P4A9 Cluster: Chromosom... 168 2e-41
gnl|LJGI|TC62544 similar to UniRef100_A7P4A9 Cluster: Chromosome... 168 2e-41
gnl|LJGI|TC60206 similar to UniRef100_A7P4A9 Cluster: Chromosome... 149 2e-35
gnl|LJGI|CB826727 similar to UniRef100_A7P4A9 Cluster: Chromosom... 113 9e-25
gnl|LJGI|TC61772 similar to UniRef100_A7NZK9 Cluster: Chromosome... 82 3e-15
>gnl|LJGI|FS358425 similar to UniRef100_A7P4A9 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (40%)
Length = 726
Score = 668 bits (337), Expect = 0.0
Identities = 337/337 (100%)
Strand = Plus / Minus
Query: 105 atttgttgagatcatggctcctgtattttccagagatgcatggcgctgtgtgtggcatat 164
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 atttgttgagatcatggctcctgtattttccagagatgcatggcgctgtgtgtggcatat 492
Query: 165 gatacagaatgacctgattcatggatggggtcttgattttgctctcagaaaatgtgtgga 224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 gatacagaatgacctgattcatggatggggtcttgattttgctctcagaaaatgtgtgga 432
Query: 225 gactcctcataagaaaataggagttgttgatgctcagtggattgtccatcaaagtgttcc 284
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 gactcctcataagaaaataggagttgttgatgctcagtggattgtccatcaaagtgttcc 372
Query: 285 ttcacttgggaaccaagggcaagcagagactggcagggcaccatgggaaggggtgaggga 344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 ttcacttgggaaccaagggcaagcagagactggcagggcaccatgggaaggggtgaggga 312
Query: 345 gaggtgtaagaaagaatggacaatgttccaagaacgtatggctaatgctgagagggacta 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 gaggtgtaagaaagaatggacaatgttccaagaacgtatggctaatgctgagagggacta 252
Query: 405 ttttcagggactgacccttaactccactggaagctag 441
|||||||||||||||||||||||||||||||||||||
Sbjct: 251 ttttcagggactgacccttaactccactggaagctag 215
Score = 206 bits (104), Expect = 8e-53
Identities = 104/104 (100%)
Strand = Plus / Minus
Query: 1 atggtaagaaagcatggtttggagatatcacaacctggtctagatcggaaaagtgatttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 atggtaagaaagcatggtttggagatatcacaacctggtctagatcggaaaagtgatttt 647
Query: 61 acatgggaaatgacacggaaaagggataaaggtgaagtacacaa 104
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 acatgggaaatgacacggaaaagggataaaggtgaagtacacaa 603
>gnl|LJGI|FS353428 similar to UniRef100_Q9LN04 Cluster: T6D22.12; n=1; Arabidopsis
thaliana|Rep: T6D22.12 - Arabidopsis thaliana (Mouse-ear
cress), partial (37%)
Length = 688
Score = 186 bits (94), Expect = 8e-47
Identities = 169/194 (87%)
Strand = Plus / Minus
Query: 106 tttgttgagatcatggctcctgtattttccagagatgcatggcgctgtgtgtggcatatg 165
||||||||||| |||||||| || ||||| ||||||||||||||||||||||||||||||
Sbjct: 445 tttgttgagattatggctccagtcttttcaagagatgcatggcgctgtgtgtggcatatg 386
Query: 166 atacagaatgacctgattcatggatggggtcttgattttgctctcagaaaatgtgtggag 225
|| |||||||| | ||||||| |||||||||||||||||| | ||||||||||| |||
Sbjct: 385 attcagaatgaatttgttcatggctggggtcttgattttgcttttagaaaatgtgttgag 326
Query: 226 actcctcataagaaaataggagttgttgatgctcagtggattgtccatcaaagtgttcct 285
|| ||||| |||| || |||||||||||||||||||||||||| || ||| | ||||
Sbjct: 325 cctgctcatgagaagattggagttgttgatgctcagtggattgttcaccaaggcattccc 266
Query: 286 tcacttgggaacca 299
||||| ||||||||
Sbjct: 265 tcactagggaacca 252
>gnl|LJGI|BW600329 similar to UniRef100_A7P4A9 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (29%)
Length = 486
Score = 168 bits (85), Expect = 2e-41
Identities = 223/269 (82%)
Strand = Plus / Plus
Query: 106 tttgttgagatcatggctcctgtattttccagagatgcatggcgctgtgtgtggcatatg 165
||||||||||| |||||||| |||||||| | ||||||||||| |||||||||||||||
Sbjct: 60 tttgttgagattatggctccagtattttcacgtgatgcatggcgttgtgtgtggcatatg 119
Query: 166 atacagaatgacctgattcatggatggggtcttgattttgctctcagaaaatgtgtggag 225
|| ||||||||| || | ||||| |||||||||||||||||||| |||| |||||| |||
Sbjct: 120 attcagaatgacttggtccatgggtggggtcttgattttgctcttagaagatgtgttgag 179
Query: 226 actcctcataagaaaataggagttgttgatgctcagtggattgtccatcaaagtgttcct 285
|| ||||| |||| || |||||||||||| |||| |||||||| || ||| |||||||
Sbjct: 180 cctgctcatgagaagattggagttgttgattctcaatggattgttcaccaaggtgttccc 239
Query: 286 tcacttgggaaccaagggcaagcagagactggcagggcaccatgggaaggggtgagggag 345
|||| ||||| || || || | | || || || ||||||| | ||||||||||||
Sbjct: 240 acactagggaatcagggtgaatcgaaaaccggtgggaaaccatggcagggggtgagggag 299
Query: 346 aggtgtaagaaagaatggacaatgttcca 374
|||||||| || || ||||| ||||||||
Sbjct: 300 aggtgtaaaaaggagtggaccatgttcca 328
>gnl|LJGI|TC62544 similar to UniRef100_A7P4A9 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (51%)
Length = 875
Score = 168 bits (85), Expect = 2e-41
Identities = 223/269 (82%)
Strand = Plus / Plus
Query: 106 tttgttgagatcatggctcctgtattttccagagatgcatggcgctgtgtgtggcatatg 165
||||||||||| |||||||| |||||||| | ||||||||||| |||||||||||||||
Sbjct: 261 tttgttgagattatggctccagtattttcacgtgatgcatggcgttgtgtgtggcatatg 320
Query: 166 atacagaatgacctgattcatggatggggtcttgattttgctctcagaaaatgtgtggag 225
|| ||||||||| || | ||||| |||||||||||||||||||| |||| |||||| |||
Sbjct: 321 attcagaatgacttggtccatgggtggggtcttgattttgctcttagaagatgtgttgag 380
Query: 226 actcctcataagaaaataggagttgttgatgctcagtggattgtccatcaaagtgttcct 285
|| ||||| |||| || |||||||||||| |||| |||||||| || ||| |||||||
Sbjct: 381 cctgctcatgagaagattggagttgttgattctcaatggattgttcaccaaggtgttccc 440
Query: 286 tcacttgggaaccaagggcaagcagagactggcagggcaccatgggaaggggtgagggag 345
|||| ||||| || || || | | || || || ||||||| | ||||||||||||
Sbjct: 441 acactagggaatcagggtgaatcgaaaaccggtgggaaaccatggcagggggtgagggag 500
Query: 346 aggtgtaagaaagaatggacaatgttcca 374
|||||||| || || ||||| ||||||||
Sbjct: 501 aggtgtaaaaaggagtggaccatgttcca 529
>gnl|LJGI|TC60206 similar to UniRef100_A7P4A9 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (86%)
Length = 1558
Score = 149 bits (75), Expect = 2e-35
Identities = 147/171 (85%)
Strand = Plus / Plus
Query: 106 tttgttgagatcatggctcctgtattttccagagatgcatggcgctgtgtgtggcatatg 165
||||||||||| |||||||| || ||||| ||||||||||||| |||||||||||||||
Sbjct: 1042 tttgttgagattatggctccggtgttttcgcgagatgcatggcgttgtgtgtggcatatg 1101
Query: 166 atacagaatgacctgattcatggatggggtcttgattttgctctcagaaaatgtgtggag 225
|| |||||||||||| ||||||| ||||||||||| || || || ||||||||||| |||
Sbjct: 1102 attcagaatgacctggttcatgggtggggtcttgacttcgcacttagaaaatgtgttgag 1161
Query: 226 actcctcataagaaaataggagttgttgatgctcagtggattgtccatcaa 276
| | ||| |||| || |||||||||||| ||||||||||| | ||||||
Sbjct: 1162 ccggcccatgagaagattggagttgttgattctcagtggattattcatcaa 1212
>gnl|LJGI|CB826727 similar to UniRef100_A7P4A9 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (27%)
Length = 459
Score = 113 bits (57), Expect = 9e-25
Identities = 123/145 (84%)
Strand = Plus / Plus
Query: 139 gatgcatggcgctgtgtgtggcatatgatacagaatgacctgattcatggatggggtctt 198
||||||||||| ||||||||||||||||| ||||||||| || | ||||| |||||||||
Sbjct: 4 gatgcatggcgttgtgtgtggcatatgattcagaatgacttggtccatgggtggggtctt 63
Query: 199 gattttgctctcagaaaatgtgtggagactcctcataagaaaataggagttgttgatgct 258
||||||||||| |||| |||||| ||| || ||||| | | | |||||||||||| ||
Sbjct: 64 gattttgctcttagaagatgtgttgagcctgctcatgatatttttggagttgttgattct 123
Query: 259 cagtggattgtccatcaaagtgttc 283
|| |||||||| || ||| ||||||
Sbjct: 124 caatggattgttcaccaaggtgttc 148
>gnl|LJGI|TC61772 similar to UniRef100_A7NZK9 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (77%)
Length = 1654
Score = 81.8 bits (41), Expect = 3e-15
Identities = 98/117 (83%)
Strand = Plus / Plus
Query: 105 atttgttgagatcatggctcctgtattttccagagatgcatggcgctgtgtgtggcatat 164
|||||| || || ||||| ||||| |||||| | || |||||||| ||||||||||||||
Sbjct: 1149 atttgtggaaattatggcgcctgtcttttcccgggaagcatggcgttgtgtgtggcatat 1208
Query: 165 gatacagaatgacctgattcatggatggggtcttgattttgctctcagaaaatgtgt 221
||| |||||||| | | ||||||||||| || || ||||||||||||| ||||||
Sbjct: 1209 gattcagaatgatttagtgcatggatggggactggactttgctctcagaagatgtgt 1265