Miyakogusa Predicted Gene
- Lj1g3v3678870.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3678870.1 CUFF.31084.1
(576 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC80858 similar to UniRef100_Q2W739 Cluster: Ubiquinone... 609 e-174
gnl|LJGI|TC60481 373 e-103
gnl|LJGI|TC80114 66 3e-10
>gnl|LJGI|TC80858 similar to UniRef100_Q2W739 Cluster: Ubiquinone biosynthesis protein
COQ7; n=1; Magnetospirillum magneticum AMB-1|Rep:
Ubiquinone biosynthesis protein COQ7 - Magnetospirillum
magneticum (strain AMB-1 / ATCC 700264), partial (8%)
Length = 1299
Score = 609 bits (307), Expect = e-174
Identities = 382/403 (94%), Gaps = 3/403 (0%)
Strand = Plus / Minus
Query: 175 tcagccatcgacataaccacgtaccttgcatcaacgccaaccaatgcccgcacgctaccc 234
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct: 1299 tcagccatcgacataaccacgtac-ttgcatcaacgccaaccaatgcccgcacgctatca 1241
Query: 235 ccacacaccttgcatccatgtcagccaatgcccatgtgctataaccacacatcttgcatt 294
|||||||| ||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 1240 ccacacac-ttgcatccatgtcagccaatgcccatgtgctatcagcacacatcttgcatt 1182
Query: 295 aaagccaaccaatgcatgtgtgtcacctggacagttacatgtccaccttgtgtagtcctg 354
|| ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1181 aataccaaccaatgcttgtgtgtcacctggacagttacatgcccaccttgtgtagtcctg 1122
Query: 355 attgcatcgaccatccatgacttgcaacaagtcaaaatacaatctctctatcacagcact 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1121 attgcatcgaccatccatgacttgcaacaagtcaaaatacaatctctctatcacagcact 1062
Query: 415 gccacataccaactgaaaaccgtgcatcaggcaggttcccgagagaacctt-caaaacag 473
|||||||||||||||||||||||||| | || ||||| | ||||||||||| ||||||||
Sbjct: 1061 gccacataccaactgaaaaccgtgcaccgggtaggtttctgagagaaccttccaaaacag 1002
Query: 474 cagtttcacagtatcatcgtggctccgagcggaagctatcctcaaagccgtcaccatggt 533
|| |||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 1001 cactttcacagtatcattgtggttccaagcggaagctatcctcaaagccgtcaccatggt 942
Query: 534 cgaaccatcggctctgataccagttgttaggaaatcgccatag 576
|||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 941 cgaaccatgggctctgataccagttgttaggaaatcgccatag 899
Score = 95.6 bits (48), Expect = 3e-19
Identities = 58/60 (96%), Gaps = 1/60 (1%)
Strand = Plus / Minus
Query: 1 atgagtacacttcacttggaattaaaccatcccaagaatttcacttcacttggaattaaa 60
|||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 59 atgagtacacttcacttgga-ttaaaccatcccaagaattttacttcacttggaattaaa 1
>gnl|LJGI|TC60481
Length = 836
Score = 373 bits (188), Expect = e-103
Identities = 226/236 (95%), Gaps = 2/236 (0%)
Strand = Plus / Plus
Query: 333 atgtccaccttgtgtagtcctgattgcatcgaccatccatgacttgcaacaagtcaaaa- 391
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 atgtcccccttgtgtagtcctgattgcatcgaccatccatgacttgcaacaagtcaaaaa 439
Query: 392 tacaatctctctatcacagcactgccacataccaactgaaaaccgtgcatcaggcaggtt 451
||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||
Sbjct: 440 tacaatctctctatcacagcactgccacataccaactgaaaaccgtgcaccaggtaggtt 499
Query: 452 cccgagagaaccttc-aaaacagcagtttcacagtatcatcgtggctccgagcggaagct 510
| |||||||||||| ||||||||| |||||||||||||| |||||||| ||||||||||
Sbjct: 500 tctgagagaaccttccaaaacagcactttcacagtatcattgtggctccaagcggaagct 559
Query: 511 atcctcaaagccgtcaccatggtcgaaccatcggctctgataccagttgttaggaa 566
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 atcctcaaagccgtcaccatggtcgaaccatcggctctgataccagttgttaggaa 615
Score = 293 bits (148), Expect = 6e-79
Identities = 181/192 (94%)
Strand = Plus / Plus
Query: 118 gaaaccttgctgaaaatttatggtgcaacttccatgatgactttctccggaagttcatca 177
||||||||||||| |||||||||||||||||||||| || |||||||| |||||||||||
Sbjct: 6 gaaaccttgctgataatttatggtgcaacttccatgttggctttctccagaagttcatca 65
Query: 178 gccatcgacataaccacgtaccttgcatcaacgccaaccaatgcccgcacgctaccccca 237
|||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 66 gccatcgacataaccacgtaccttgcatcaacgccaaccaatgcccgcacgctatcacca 125
Query: 238 cacaccttgcatccatgtcagccaatgcccatgtgctataaccacacatcttgcattaaa 297
||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct: 126 cacaccttgcatccatgtccgttaatgcccatgtgctataaccacacatcttgcattaat 185
Query: 298 gccaaccaatgc 309
| ||||||||||
Sbjct: 186 gtcaaccaatgc 197
>gnl|LJGI|TC80114
Length = 764
Score = 65.9 bits (33), Expect = 3e-10
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 79 tcacttggaactaaaccattccaagaatttacacatgctgaaaccttgctgaaaatttat 138
|||||||||||||||||||||||||||||| |||| |||||| ||||||||| ||||
Sbjct: 61 tcacttggaactaaaccattccaagaatttcttcatgtcgaaaccatgctgaaaagttat 2
Query: 139 g 139
|
Sbjct: 1 g 1