Miyakogusa Predicted Gene

Lj1g3v3668860.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v3668860.1 Non Chatacterized Hit- tr|I1MLT1|I1MLT1_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max PE=4,75.2,0,NAC
domain,No apical meristem (NAM) protein; NAM,No apical meristem (NAM)
protein; SUBFAMILY NOT NAM,CUFF.31083.1
         (1194 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS323117 similar to UniRef100_A7PM16 Cluster: Chromosom...  1130   0.0  
gnl|LJGI|TC64736 similar to UniRef100_A7PM16 Cluster: Chromosome...   517   e-146

>gnl|LJGI|FS323117 similar to UniRef100_A7PM16 Cluster: Chromosome chr14 scaffold_21,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr14 scaffold_21, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (46%)
          Length = 642

 Score = 1130 bits (570), Expect = 0.0
 Identities = 573/574 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggctaggagttggcttattgacataggaggatttgcaaagaaagtaaaaagcactgct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69  atggctaggagttggcttattgacataggaggatttgcaaagaaagtaaaaagcactgct 128

                                                                       
Query: 61  ttatcttcatctgaacagatcaaggattgcggggcatatcgcgaatgcccgaactgtagt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 ttatcttcatctgaacagatcaaggattgcggggcatatcgcgaatgcccgaactgtagt 188

                                                                       
Query: 121 tatcatatagataatagtgatgtttctattgagtggcctggctttcctgttggtgtaaag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 tatcatatagataatagtgatgtttctattgagtggcctggctttcctgttggtgtaaag 248

                                                                       
Query: 181 tttgatccttctgatgccgaactcttagaacatttagcagcaaaatgtggtattgggaat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tttgatccttctgatgccgaactcttagaacatttagcagcaaaatgtggtattgggaat 308

                                                                       
Query: 241 gcaaagccacacatgtttatccaggagttcatcccaacactggaaggagatgaaggtatt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gcaaagccacacatgtttatccaggagttcatcccaacactggaaggagatgaaggtatt 368

                                                                       
Query: 301 tgctatacacatccagaaaatcttccaggtgctaataaagatgggagctatgtccatttc 360
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 369 tgctatacacatccagaaaatcttccaggtgctaagaaagatgggagctatgtccatttc 428

                                                                       
Query: 361 tttaacagaacaattaatgcctatactactggtcaacggaagcgtcgaaggattcattat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 tttaacagaacaattaatgcctatactactggtcaacggaagcgtcgaaggattcattat 488

                                                                       
Query: 421 gatggtctgactgaagaccatgtacgctggcataagactggtaagaccaaagctgttgtc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 gatggtctgactgaagaccatgtacgctggcataagactggtaagaccaaagctgttgtc 548

                                                                       
Query: 481 gaaaatggagtacataagggctataagaaaatcatggttctttatataagatctaataaa 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 gaaaatggagtacataagggctataagaaaatcatggttctttatataagatctaataaa 608

                                             
Query: 541 gggtccaagccctctaaatccaactggataatgc 574
           ||||||||||||||||||||||||||||||||||
Sbjct: 609 gggtccaagccctctaaatccaactggataatgc 642


>gnl|LJGI|TC64736 similar to UniRef100_A7PM16 Cluster: Chromosome chr14 scaffold_21,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr14 scaffold_21, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (7%)
          Length = 681

 Score =  517 bits (261), Expect = e-146
 Identities = 261/261 (100%)
 Strand = Plus / Plus

                                                                        
Query: 934  gagtttgatggcttggatgacatattgttgtgcaatgagattttggattcttctgctcta 993
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    gagtttgatggcttggatgacatattgttgtgcaatgagattttggattcttctgctcta 60

                                                                        
Query: 994  ttaaatgatgattttggattggactccaccactcttaatggcttttcttcctatgataac 1053
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   ttaaatgatgattttggattggactccaccactcttaatggcttttcttcctatgataac 120

                                                                        
Query: 1054 ataatggctggaaatgataatgtgactcgtggaacttctgtcctggatacactggaattg 1113
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  ataatggctggaaatgataatgtgactcgtggaacttctgtcctggatacactggaattg 180

                                                                        
Query: 1114 gatactcctccagattttgatctttcgaatttgaactttggttctcaagatagtatcctt 1173
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  gatactcctccagattttgatctttcgaatttgaactttggttctcaagatagtatcctt 240

                                 
Query: 1174 gggtggatggacaggttatga 1194
            |||||||||||||||||||||
Sbjct: 241  gggtggatggacaggttatga 261