Miyakogusa Predicted Gene

Lj1g3v3643320.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v3643320.1 tr|Q66J56|Q66J56_XENLA MGC81848 protein
OS=Xenopus laevis GN=txnrd3 PE=2
SV=1,55.84,2e-19,GLUTAREDOXIN,Glutaredoxin subgroup;
Thioredoxin-like,Thioredoxin-like fold; GLUTAREDOXIN,NULL;
Gluta,CUFF.31025.1
         (246 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC67990 similar to UniRef100_Q945T3 Cluster: Glutaredox...   488   e-138
gnl|LJGI|TC57463 similar to UniRef100_A7Q1G5 Cluster: Chromosome...    64   4e-10
gnl|LJGI|TC66048 similar to UniRef100_A7Q1G5 Cluster: Chromosome...    56   1e-07
gnl|LJGI|TC59021 similar to UniRef100_A7PCX4 Cluster: Chromosome...    54   4e-07

>gnl|LJGI|TC67990 similar to UniRef100_Q945T3 Cluster: Glutaredoxin; n=1; Tilia
           platyphyllos|Rep: Glutaredoxin - Tilia platyphyllos
           (Large-leaved lime), partial (86%)
          Length = 573

 Score =  488 bits (246), Expect = e-138
 Identities = 246/246 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcgctacccaaagccaaggagatcgtgtcttccaacgccgtcgtcgttttcagcaaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 atggcgctacccaaagccaaggagatcgtgtcttccaacgccgtcgtcgttttcagcaaa 162

                                                                       
Query: 61  acctattgccctttctgcgtcgatgtgaagaagcttttcgctaacctaggtgtcaattac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 acctattgccctttctgcgtcgatgtgaagaagcttttcgctaacctaggtgtcaattac 222

                                                                       
Query: 121 aaggttattgagcttgattctgaagctgatggaagtgatatccaagcagcattagccgag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 aaggttattgagcttgattctgaagctgatggaagtgatatccaagcagcattagccgag 282

                                                                       
Query: 181 tggactggtcagcggtctgtgccgaatgtgtttattggtggaaaccacattggtggctgt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 tggactggtcagcggtctgtgccgaatgtgtttattggtggaaaccacattggtggctgt 342

                 
Query: 241 gactca 246
           ||||||
Sbjct: 343 gactca 348


>gnl|LJGI|TC57463 similar to UniRef100_A7Q1G5 Cluster: Chromosome chr7 scaffold_44,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr7 scaffold_44, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (92%)
          Length = 929

 Score = 63.9 bits (32), Expect = 4e-10
 Identities = 38/40 (95%)
 Strand = Plus / Plus

                                                   
Query: 197 ctgtgccgaatgtgtttattggtggaaaccacattggtgg 236
           ||||||| |||||||||||||||||||| |||||||||||
Sbjct: 535 ctgtgccaaatgtgtttattggtggaaaacacattggtgg 574


>gnl|LJGI|TC66048 similar to UniRef100_A7Q1G5 Cluster: Chromosome chr7 scaffold_44,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr7 scaffold_44, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (75%)
          Length = 767

 Score = 56.0 bits (28), Expect = 1e-07
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                           
Query: 205 aatgtgtttattggtggaaaccacattggtgg 236
           |||||||||||||||||||| |||||||||||
Sbjct: 436 aatgtgtttattggtggaaaacacattggtgg 467


>gnl|LJGI|TC59021 similar to UniRef100_A7PCX4 Cluster: Chromosome chr17 scaffold_12,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr17 scaffold_12, whole genome shotgun
           sequence - Vitis vinifera (Grape), complete
          Length = 848

 Score = 54.0 bits (27), Expect = 4e-07
 Identities = 60/71 (84%)
 Strand = Plus / Plus

                                                                       
Query: 173 tagccgagtggactggtcagcggtctgtgccgaatgtgtttattggtggaaaccacattg 232
           |||| |||||||| |||||| || | ||||| || ||||| ||||| ||||| |||||||
Sbjct: 397 tagctgagtggacaggtcagaggacggtgccaaacgtgttcattggaggaaaacacattg 456

                      
Query: 233 gtggctgtgac 243
           |||| ||||||
Sbjct: 457 gtggttgtgac 467