Miyakogusa Predicted Gene
- Lj1g3v3642070.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3642070.1 Non Chatacterized Hit- tr|Q60ET1|Q60ET1_ORYSJ
Putative uncharacterized protein OJ1504_G04.6
OS=Oryza,32.2,4e-17,PWWP,PWWP; Tudor/PWWP/MBT,NULL; no
description,NULL; seg,NULL; domain with conserved PWWP
motif,PWWP,CUFF.31061.1
(2761 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO011392 similar to UniRef100_A3KB25 Cluster: Transcrip... 1298 0.0
gnl|LJGI|BP084604 weakly similar to UniRef100_A7PM85 Cluster: Ch... 521 e-147
gnl|LJGI|BP062911 224 2e-57
gnl|LJGI|BP063472 similar to UniRef100_A7PM85 Cluster: Chromosom... 82 2e-14
gnl|LJGI|TC61510 60 8e-08
>gnl|LJGI|GO011392 similar to UniRef100_A3KB25 Cluster: Transcriptional regulator, ArsR
family protein; n=1; Sagittula stellata E-37|Rep:
Transcriptional regulator, ArsR family protein -
Sagittula stellata E-37, partial (15%)
Length = 655
Score = 1298 bits (655), Expect = 0.0
Identities = 655/655 (100%)
Strand = Plus / Plus
Query: 762 ggaagctgcaaatgaggttggaaggcttttggattcgaaaatgagttatttatctgttgc 821
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggaagctgcaaatgaggttggaaggcttttggattcgaaaatgagttatttatctgttgc 60
Query: 822 cagggaaactaggtctggatgtactcggtcattggcaagcaacgctggaatcaaggaagg 881
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cagggaaactaggtctggatgtactcggtcattggcaagcaacgctggaatcaaggaagg 120
Query: 882 agtacatatacctgaaaatggtgttgggaggctttcagatgttctgattgatccagcaga 941
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agtacatatacctgaaaatggtgttgggaggctttcagatgttctgattgatccagcaga 180
Query: 942 attacttactggagtgaaacaaattgcaaaaattatttccatttctagtattctgaatct 1001
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 attacttactggagtgaaacaaattgcaaaaattatttccatttctagtattctgaatct 240
Query: 1002 cgaaatattaaaggctcggctatcagcctttaatctatcaagaggaggatgtaaattacc 1061
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cgaaatattaaaggctcggctatcagcctttaatctatcaagaggaggatgtaaattacc 300
Query: 1062 tagttatgaggtgcctcagcctattcctggacttgaagataaagaaacagtgggtgtagt 1121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tagttatgaggtgcctcagcctattcctggacttgaagataaagaaacagtgggtgtagt 360
Query: 1122 taccagcagtaagtgtgtagtggaagcacccgcccaagggccttttgaagatgactattt 1181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 taccagcagtaagtgtgtagtggaagcacccgcccaagggccttttgaagatgactattt 420
Query: 1182 tatcttgccaggtagcccaaaatcaggtgagttagatcattctcatgggattccccgaaa 1241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tatcttgccaggtagcccaaaatcaggtgagttagatcattctcatgggattccccgaaa 480
Query: 1242 gaggttgaatcatagaattaagcaaaaaagcattgctgaaattctgggggcggacaaaga 1301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gaggttgaatcatagaattaagcaaaaaagcattgctgaaattctgggggcggacaaaga 540
Query: 1302 tgttaataccaaaaataaggagggaaatgcaactgaggactcagtggcatctaaaccagt 1361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tgttaataccaaaaataaggagggaaatgcaactgaggactcagtggcatctaaaccagt 600
Query: 1362 gcagaagagaaaagggttgcctacaagtactgacattaacatggcaagtgctaaa 1416
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gcagaagagaaaagggttgcctacaagtactgacattaacatggcaagtgctaaa 655
>gnl|LJGI|BP084604 weakly similar to UniRef100_A7PM85 Cluster: Chromosome chr14
scaffold_21, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_21, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (3%)
Length = 463
Score = 521 bits (263), Expect = e-147
Identities = 263/263 (100%)
Strand = Plus / Minus
Query: 2499 ttctgtagcaaatggtgaaatatctaagatcaaagcttcttcaactaagaagaaagacaa 2558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 ttctgtagcaaatggtgaaatatctaagatcaaagcttcttcaactaagaagaaagacaa 404
Query: 2559 gactccagccaagccatcttcttcattgtcaccaggtagtgaagcatccaaactgaacta 2618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 gactccagccaagccatcttcttcattgtcaccaggtagtgaagcatccaaactgaacta 344
Query: 2619 catcaagcagaaacttcagggtctcacctcaatgctggaagcgtccgattttaaatcact 2678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 catcaagcagaaacttcagggtctcacctcaatgctggaagcgtccgattttaaatcact 284
Query: 2679 ggatacgaaggcaaaactagagagcgagatgaaagggcttttgcaggatgtgagcaaaat 2738
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 ggatacgaaggcaaaactagagagcgagatgaaagggcttttgcaggatgtgagcaaaat 224
Query: 2739 ggtcgaatcttcttcgtcatagc 2761
|||||||||||||||||||||||
Sbjct: 223 ggtcgaatcttcttcgtcatagc 201
>gnl|LJGI|BP062911
Length = 395
Score = 224 bits (113), Expect = 2e-57
Identities = 115/116 (99%)
Strand = Plus / Plus
Query: 1 atgacccggtcgaaagccccatctgggtgttcttctccttgtccagagaatgacaagaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 atgacccggtcgaaagccccatctgggtgttcttctccttgtccagagaatgacaagaat 339
Query: 61 gagctcagggaagctttgtgtgctttgaaaagtggtatcctagaaaatggggctgg 116
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 340 gagctcagggaagcttngtgtgctttgaaaagtggtatcctagaaaatggggctgg 395
>gnl|LJGI|BP063472 similar to UniRef100_A7PM85 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (3%)
Length = 459
Score = 81.8 bits (41), Expect = 2e-14
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 500 gtgatgaaggatatgagttttctgttggtgattttgtatgggggaaaattaagagtcatc 559
|||||||||| |||| |||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 399 gtgatgaagggtatggattttctgttggtgattttgtttggggcaaaattaagagtcatc 458
Query: 560 c 560
|
Sbjct: 459 c 459
>gnl|LJGI|TC61510
Length = 792
Score = 60.0 bits (30), Expect = 8e-08
Identities = 153/194 (78%)
Strand = Plus / Plus
Query: 909 gaggctttcagatgttctgattgatccagcagaattacttactggagtgaaacaaattgc 968
||||||||||| | ||| ||||| ||||| || |||||| | ||||||||| |||||
Sbjct: 209 gaggctttcaggttttccaattgaaccagctgagttactttcccaagtgaaacacattgc 268
Query: 969 aaaaattatttccatttctagtattctgaatctcgaaatattaaaggctcggctatcagc 1028
| |||||||| | | | ||||||| ||| | || ||||| |||||||| || || ||||
Sbjct: 269 agaaattattgctactgctagtatcctggagctggaaatgttaaaggcacgactttcagt 328
Query: 1029 ctttaatctatcaagaggaggatgtaaattacctagttatgaggtgcctcagcctattcc 1088
|| |||||||||||||||| | || ||| || |||||||| || ||||| ||||
Sbjct: 329 gttctatctatcaagaggaggttttacattggctgcttatgaggatccccagccggttcc 388
Query: 1089 tggacttgaagata 1102
||||||||||||||
Sbjct: 389 tggacttgaagata 402
Score = 54.0 bits (27), Expect = 5e-06
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 742 gcttttgtaaatgctgtacaggaagctgcaaatgaggttggaaggcttttg 792
|||||||| ||||||||||| || |||| | |||||||||||||||||||
Sbjct: 42 gcttttgtcaatgctgtacaagaggctgtgagtgaggttggaaggcttttg 92