Miyakogusa Predicted Gene

Lj1g3v3608330.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v3608330.1 tr|Q9LN54|Q9LN54_ARATH F18O14.16 OS=Arabidopsis
thaliana PE=4 SV=1,48.28,9.3,seg,NULL,CUFF.30981.1
         (649 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC70459 weakly similar to UniRef100_Q8YV91 Cluster: Alr...   841   0.0  
gnl|LJGI|TC58095 weakly similar to UniRef100_Q9JGS9 Cluster: POR...   841   0.0  
gnl|LJGI|BI420293 weakly similar to UniRef100_Q9ZV05 Cluster: Ex...   151   6e-36

>gnl|LJGI|TC70459 weakly similar to UniRef100_Q8YV91 Cluster: Alr2090 protein; n=1;
           Nostoc sp. PCC 7120|Rep: Alr2090 protein - Anabaena sp.
           (strain PCC 7120), partial (5%)
          Length = 596

 Score =  841 bits (424), Expect = 0.0
 Identities = 424/424 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   atggtggtgatgaccgtgtgcgtggtgacggcggtagtggtgaacatcgtggcgatccat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 atggtggtgatgaccgtgtgcgtggtgacggcggtagtggtgaacatcgtggcgatccat 529

                                                                       
Query: 61  catctccatctccgggagcctctgcacagcgctgtgagacctcaggaacggtcggcgatc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 catctccatctccgggagcctctgcacagcgctgtgagacctcaggaacggtcggcgatc 469

                                                                       
Query: 121 gccgtcggtgagcacgatcgcatcgttaccgtagtggatctcgcggcgatccatcatctc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 gccgtcggtgagcacgatcgcatcgttaccgtagtggatctcgcggcgatccatcatctc 409

                                                                       
Query: 181 catctccgggagcctctgcgctttgctgtgagacctcaggaacggtcggcgagcgccgtc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 catctccgggagcctctgcgctttgctgtgagacctcaggaacggtcggcgagcgccgtc 349

                                                                       
Query: 241 ggtgagcacgatcccgtcgttgccgtagtggatctcacggcggtggtggcacgggcggcg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 ggtgagcacgatcccgtcgttgccgtagtggatctcacggcggtggtggcacgggcggcg 289

                                                                       
Query: 301 agggtggacgtgacggcgaccgtcgattgggcggagactgaggatggtcaacgggacagg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 agggtggacgtgacggcgaccgtcgattgggcggagactgaggatggtcaacgggacagg 229

                                                                       
Query: 361 gtcaacggattcgagggagagcgaaacggtgtcgtgttgttcgggtttgatgtttgttat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 gtcaacggattcgagggagagcgaaacggtgtcgtgttgttcgggtttgatgtttgttat 169

               
Query: 421 gcgt 424
           ||||
Sbjct: 168 gcgt 165



 Score =  180 bits (91), Expect = 7e-45
 Identities = 91/91 (100%)
 Strand = Plus / Minus

                                                                       
Query: 492 agggttgttgcagatcgcgggcgtgggagaaggtgaagaggatgaggaaggcagcgaagg 551
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91  agggttgttgcagatcgcgggcgtgggagaaggtgaagaggatgaggaaggcagcgaagg 32

                                          
Query: 552 aaagagcgagtttggccatggtttcaagtgt 582
           |||||||||||||||||||||||||||||||
Sbjct: 31  aaagagcgagtttggccatggtttcaagtgt 1


>gnl|LJGI|TC58095 weakly similar to UniRef100_Q9JGS9 Cluster: PORF2b; n=2; Torque
           teno virus|Rep: PORF2b - Torque teno virus, partial
           (23%)
          Length = 935

 Score =  841 bits (424), Expect = 0.0
 Identities = 424/424 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   atggtggtgatgaccgtgtgcgtggtgacggcggtagtggtgaacatcgtggcgatccat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 atggtggtgatgaccgtgtgcgtggtgacggcggtagtggtgaacatcgtggcgatccat 543

                                                                       
Query: 61  catctccatctccgggagcctctgcacagcgctgtgagacctcaggaacggtcggcgatc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 catctccatctccgggagcctctgcacagcgctgtgagacctcaggaacggtcggcgatc 483

                                                                       
Query: 121 gccgtcggtgagcacgatcgcatcgttaccgtagtggatctcgcggcgatccatcatctc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 gccgtcggtgagcacgatcgcatcgttaccgtagtggatctcgcggcgatccatcatctc 423

                                                                       
Query: 181 catctccgggagcctctgcgctttgctgtgagacctcaggaacggtcggcgagcgccgtc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 catctccgggagcctctgcgctttgctgtgagacctcaggaacggtcggcgagcgccgtc 363

                                                                       
Query: 241 ggtgagcacgatcccgtcgttgccgtagtggatctcacggcggtggtggcacgggcggcg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ggtgagcacgatcccgtcgttgccgtagtggatctcacggcggtggtggcacgggcggcg 303

                                                                       
Query: 301 agggtggacgtgacggcgaccgtcgattgggcggagactgaggatggtcaacgggacagg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 agggtggacgtgacggcgaccgtcgattgggcggagactgaggatggtcaacgggacagg 243

                                                                       
Query: 361 gtcaacggattcgagggagagcgaaacggtgtcgtgttgttcgggtttgatgtttgttat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gtcaacggattcgagggagagcgaaacggtgtcgtgttgttcgggtttgatgtttgttat 183

               
Query: 421 gcgt 424
           ||||
Sbjct: 182 gcgt 179



 Score =  216 bits (109), Expect = 1e-55
 Identities = 109/109 (100%)
 Strand = Plus / Minus

                                                                       
Query: 492 agggttgttgcagatcgcgggcgtgggagaaggtgaagaggatgaggaaggcagcgaagg 551
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 agggttgttgcagatcgcgggcgtgggagaaggtgaagaggatgaggaaggcagcgaagg 52

                                                            
Query: 552 aaagagcgagtttggccatggtttcaagtgtagaaggagtggaatttgg 600
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51  aaagagcgagtttggccatggtttcaagtgtagaaggagtggaatttgg 3


>gnl|LJGI|BI420293 weakly similar to UniRef100_Q9ZV05 Cluster: Expressed protein; n=2;
           Arabidopsis thaliana|Rep: Expressed protein -
           Arabidopsis thaliana, partial (33%)
          Length = 520

 Score =  151 bits (76), Expect = 6e-36
 Identities = 76/76 (100%)
 Strand = Plus / Minus

                                                                       
Query: 504 gatcgcgggcgtgggagaaggtgaagaggatgaggaaggcagcgaaggaaagagcgagtt 563
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76  gatcgcgggcgtgggagaaggtgaagaggatgaggaaggcagcgaaggaaagagcgagtt 17

                           
Query: 564 tggccatggtttcaag 579
           ||||||||||||||||
Sbjct: 16  tggccatggtttcaag 1