Miyakogusa Predicted Gene
- Lj1g3v3608330.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3608330.1 tr|Q9LN54|Q9LN54_ARATH F18O14.16 OS=Arabidopsis
thaliana PE=4 SV=1,48.28,9.3,seg,NULL,CUFF.30981.1
(649 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC70459 weakly similar to UniRef100_Q8YV91 Cluster: Alr... 841 0.0
gnl|LJGI|TC58095 weakly similar to UniRef100_Q9JGS9 Cluster: POR... 841 0.0
gnl|LJGI|BI420293 weakly similar to UniRef100_Q9ZV05 Cluster: Ex... 151 6e-36
>gnl|LJGI|TC70459 weakly similar to UniRef100_Q8YV91 Cluster: Alr2090 protein; n=1;
Nostoc sp. PCC 7120|Rep: Alr2090 protein - Anabaena sp.
(strain PCC 7120), partial (5%)
Length = 596
Score = 841 bits (424), Expect = 0.0
Identities = 424/424 (100%)
Strand = Plus / Minus
Query: 1 atggtggtgatgaccgtgtgcgtggtgacggcggtagtggtgaacatcgtggcgatccat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 atggtggtgatgaccgtgtgcgtggtgacggcggtagtggtgaacatcgtggcgatccat 529
Query: 61 catctccatctccgggagcctctgcacagcgctgtgagacctcaggaacggtcggcgatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 catctccatctccgggagcctctgcacagcgctgtgagacctcaggaacggtcggcgatc 469
Query: 121 gccgtcggtgagcacgatcgcatcgttaccgtagtggatctcgcggcgatccatcatctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 gccgtcggtgagcacgatcgcatcgttaccgtagtggatctcgcggcgatccatcatctc 409
Query: 181 catctccgggagcctctgcgctttgctgtgagacctcaggaacggtcggcgagcgccgtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 catctccgggagcctctgcgctttgctgtgagacctcaggaacggtcggcgagcgccgtc 349
Query: 241 ggtgagcacgatcccgtcgttgccgtagtggatctcacggcggtggtggcacgggcggcg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 ggtgagcacgatcccgtcgttgccgtagtggatctcacggcggtggtggcacgggcggcg 289
Query: 301 agggtggacgtgacggcgaccgtcgattgggcggagactgaggatggtcaacgggacagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 agggtggacgtgacggcgaccgtcgattgggcggagactgaggatggtcaacgggacagg 229
Query: 361 gtcaacggattcgagggagagcgaaacggtgtcgtgttgttcgggtttgatgtttgttat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 gtcaacggattcgagggagagcgaaacggtgtcgtgttgttcgggtttgatgtttgttat 169
Query: 421 gcgt 424
||||
Sbjct: 168 gcgt 165
Score = 180 bits (91), Expect = 7e-45
Identities = 91/91 (100%)
Strand = Plus / Minus
Query: 492 agggttgttgcagatcgcgggcgtgggagaaggtgaagaggatgaggaaggcagcgaagg 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91 agggttgttgcagatcgcgggcgtgggagaaggtgaagaggatgaggaaggcagcgaagg 32
Query: 552 aaagagcgagtttggccatggtttcaagtgt 582
|||||||||||||||||||||||||||||||
Sbjct: 31 aaagagcgagtttggccatggtttcaagtgt 1
>gnl|LJGI|TC58095 weakly similar to UniRef100_Q9JGS9 Cluster: PORF2b; n=2; Torque
teno virus|Rep: PORF2b - Torque teno virus, partial
(23%)
Length = 935
Score = 841 bits (424), Expect = 0.0
Identities = 424/424 (100%)
Strand = Plus / Minus
Query: 1 atggtggtgatgaccgtgtgcgtggtgacggcggtagtggtgaacatcgtggcgatccat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 atggtggtgatgaccgtgtgcgtggtgacggcggtagtggtgaacatcgtggcgatccat 543
Query: 61 catctccatctccgggagcctctgcacagcgctgtgagacctcaggaacggtcggcgatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 catctccatctccgggagcctctgcacagcgctgtgagacctcaggaacggtcggcgatc 483
Query: 121 gccgtcggtgagcacgatcgcatcgttaccgtagtggatctcgcggcgatccatcatctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 gccgtcggtgagcacgatcgcatcgttaccgtagtggatctcgcggcgatccatcatctc 423
Query: 181 catctccgggagcctctgcgctttgctgtgagacctcaggaacggtcggcgagcgccgtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 catctccgggagcctctgcgctttgctgtgagacctcaggaacggtcggcgagcgccgtc 363
Query: 241 ggtgagcacgatcccgtcgttgccgtagtggatctcacggcggtggtggcacgggcggcg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ggtgagcacgatcccgtcgttgccgtagtggatctcacggcggtggtggcacgggcggcg 303
Query: 301 agggtggacgtgacggcgaccgtcgattgggcggagactgaggatggtcaacgggacagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 agggtggacgtgacggcgaccgtcgattgggcggagactgaggatggtcaacgggacagg 243
Query: 361 gtcaacggattcgagggagagcgaaacggtgtcgtgttgttcgggtttgatgtttgttat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gtcaacggattcgagggagagcgaaacggtgtcgtgttgttcgggtttgatgtttgttat 183
Query: 421 gcgt 424
||||
Sbjct: 182 gcgt 179
Score = 216 bits (109), Expect = 1e-55
Identities = 109/109 (100%)
Strand = Plus / Minus
Query: 492 agggttgttgcagatcgcgggcgtgggagaaggtgaagaggatgaggaaggcagcgaagg 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 agggttgttgcagatcgcgggcgtgggagaaggtgaagaggatgaggaaggcagcgaagg 52
Query: 552 aaagagcgagtttggccatggtttcaagtgtagaaggagtggaatttgg 600
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51 aaagagcgagtttggccatggtttcaagtgtagaaggagtggaatttgg 3
>gnl|LJGI|BI420293 weakly similar to UniRef100_Q9ZV05 Cluster: Expressed protein; n=2;
Arabidopsis thaliana|Rep: Expressed protein -
Arabidopsis thaliana, partial (33%)
Length = 520
Score = 151 bits (76), Expect = 6e-36
Identities = 76/76 (100%)
Strand = Plus / Minus
Query: 504 gatcgcgggcgtgggagaaggtgaagaggatgaggaaggcagcgaaggaaagagcgagtt 563
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76 gatcgcgggcgtgggagaaggtgaagaggatgaggaaggcagcgaaggaaagagcgagtt 17
Query: 564 tggccatggtttcaag 579
||||||||||||||||
Sbjct: 16 tggccatggtttcaag 1