Miyakogusa Predicted Gene

Lj1g3v3608310.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v3608310.1 Non Chatacterized Hit- tr|J9EQG7|J9EQG7_9SPIT
Uncharacterized protein OS=Oxytricha trifallax PE=4
SV,36.62,6e-19,Possible plasma membrane-binding motif in ju,MORN
motif; seg,NULL; MORN,MORN motif; Histone H3 K4-sp,CUFF.30953.1
         (717 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC59707 homologue to UniRef100_A7PK60 Cluster: Chromoso...  1096   0.0  

>gnl|LJGI|TC59707 homologue to UniRef100_A7PK60 Cluster: Chromosome chr15
           scaffold_19, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr15 scaffold_19, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (35%)
          Length = 978

 Score = 1096 bits (553), Expect = 0.0
 Identities = 559/561 (99%)
 Strand = Plus / Plus

                                                                       
Query: 157 ggggaatggtctaatgggcagagtcatggttgtggtgttcacacctgtgaagatggaagc 216
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1   ggggaatggtctaatgggcagagtcatggttgtggtgttcacacctgtgaagatggaaac 60

                                                                       
Query: 217 aggtacgttggggagttcaagtggggagttaagcatggccttggaccctaccatttcagg 276
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 61  aggtacgttggggagttcaagtggggagttaagcatggccttggacactaccatttcagg 120

                                                                       
Query: 277 aatggagacacatatgcgggggaatactttgcggacaagatgcatgggtttggggtatat 336
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aatggagacacatatgcgggggaatactttgcggacaagatgcatgggtttggggtatat 180

                                                                       
Query: 337 cgttttgcaaatggtcatcgatatgaaggagcctggcatgagggcagaaggcaaggactt 396
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cgttttgcaaatggtcatcgatatgaaggagcctggcatgagggcagaaggcaaggactt 240

                                                                       
Query: 397 ggaatgtatacatttagaaatggtgaaacccaatctggtcactggcaaagtggagtcctt 456
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggaatgtatacatttagaaatggtgaaacccaatctggtcactggcaaagtggagtcctt 300

                                                                       
Query: 457 gacattccaagcacccagaacacgacctatccagtttctcctgtcggtgtcaatcattct 516
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gacattccaagcacccagaacacgacctatccagtttctcctgtcggtgtcaatcattct 360

                                                                       
Query: 517 aaagtactcaatgcggtgcaggaagcaagacgagcagcagagaaagcctatgatgtggcc 576
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aaagtactcaatgcggtgcaggaagcaagacgagcagcagagaaagcctatgatgtggcc 420

                                                                       
Query: 577 aaggtagatgaaagggtaaacaaggcagtagcagctgctaatagagcagccaatgcagct 636
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aaggtagatgaaagggtaaacaaggcagtagcagctgctaatagagcagccaatgcagct 480

                                                                       
Query: 637 agagtagctgctgtcaaggctgtgcaaaaacaaatgcatcatgtcaacaatgaaagcttc 696
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 agagtagctgctgtcaaggctgtgcaaaaacaaatgcatcatgtcaacaatgaaagcttc 540

                                
Query: 697 ccaattcctgttatgtaagac 717
           |||||||||||||||||||||
Sbjct: 541 ccaattcctgttatgtaagac 561