Miyakogusa Predicted Gene
- Lj1g3v3598300.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3598300.2 Non Chatacterized Hit- tr|F0W8U3|F0W8U3_9STRA
Regulator of chromosome condensation (RCC1)like
protei,28.72,1e-18,RCC1,Regulator of chromosome condensation, RCC1;
RCC1_2,Regulator of chromosome condensation, RCC1; ,CUFF.30955.2
(1347 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72440 similar to UniRef100_A2Q2N3 Cluster: Regulator ... 1265 0.0
gnl|LJGI|FS349851 similar to UniRef100_A2Q2N3 Cluster: Regulator... 914 0.0
gnl|LJGI|TC70348 similar to UniRef100_A2Q2N3 Cluster: Regulator ... 864 0.0
gnl|LJGI|BP052920 similar to UniRef100_A2Q2N3 Cluster: Regulator... 311 6e-84
>gnl|LJGI|TC72440 similar to UniRef100_A2Q2N3 Cluster: Regulator of chromosome
condensation/beta-lactamase-inhibitor protein II; n=1;
Medicago truncatula|Rep: Regulator of chromosome
condensation/beta-lactamase-inhibitor protein II -
Medicago truncatula (Barrel medic), partial (38%)
Length = 735
Score = 1265 bits (638), Expect = 0.0
Identities = 653/658 (99%)
Strand = Plus / Plus
Query: 1 atggcaatcgccagccatcgccaccaaatagccaccatccctcggcgcttgtgttgctcc 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 53 atggcaatcgccagccatcgccaccaaatagccaccatcactcggcgcttgtgttgctcc 112
Query: 61 tactcctcctccccctccgccgctaaaccccctctcctctacaccacagacacacccgac 120
||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 tactcctccacctcctccgccgctaaaccccctctcctctacaccacagacacacccgac 172
Query: 121 accgaaaccacaaccatccagctcctctcatggggcaagggcgcctcaggtcaactcggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 accgaaaccacaaccatccagctcctctcatggggcaagggcgcctcaggtcaactcggc 232
Query: 181 ggcggcgtcgaagaagttcgcctctacccttctccggtggccaacctggtcatccccaag 240
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 ggcggcgtcaaagaagttcgcctctacccttctccggtggccaacctggtcatccccaag 292
Query: 241 tcctcgttcgccctctcccgaaccccagggaggctccaccatgagagtaccaacaaggag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 tcctcgttcgccctctcccgaaccccagggaggctccaccatgagagtaccaacaaggag 352
Query: 301 gtggtggaattgggcatctcgtgtgggcttttccactcttccctggtcgtcgatggtgcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 353 gtggtggaattgggcatctcgtgtgggcttttccactcttccctggtcgtcaatggtgcc 412
Query: 361 ctttgggtttggggcaaaggcgacggcggaagattgggattgggccatgagcatccattg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 ctttgggtttggggcaaaggcgacggcggaagattgggattgggccatgagcatccattg 472
Query: 421 ttcgttcctaccttgaaccctcacctggacgacgttcgctctgttgccctcggtggcctc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 ttcgttcctaccttgaaccctcacctggacgacgttcgctctgttgccctcggtggcctc 532
Query: 481 cattccgttgcgcttgtttcccccggcgaggttttcacttggggttatggtggtttcggc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 cattccgttgcgcttgtttcccccggcgaggttttcacttggggttatggtggtttcggc 592
Query: 541 gcgcttggacacgctgtatatcatagagagctgttgcctaggttggtagaaggctgctgg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 gcgcttggacacgctgtatatcatagagagctgttgcctaggttggtagaaggctgctgg 652
Query: 601 gagggaactataaaacacattgctacaagtggaacacatactgctgcactcacagagt 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 gagggaactataaaacacattgctacaagtggaacacatactgctgcactcacagagt 710
>gnl|LJGI|FS349851 similar to UniRef100_A2Q2N3 Cluster: Regulator of chromosome
condensation/beta-lactamase-inhibitor protein II; n=1;
Medicago truncatula|Rep: Regulator of chromosome
condensation/beta-lactamase-inhibitor protein II -
Medicago truncatula (Barrel medic), partial (35%)
Length = 575
Score = 914 bits (461), Expect = 0.0
Identities = 464/465 (99%)
Strand = Plus / Minus
Query: 883 gaacttgggagaggtgataagataggtggttggaaaccaagaccagtacccagccttgag 942
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 gaacttgggagaggtgataagataggtggttggaaaccaagaccagtacccagccttgag 516
Query: 943 aatgttcgaataattcaaatagcaagtggaggatatcactcccttgcattaaccgataat 1002
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 aatgttcgaataattcaaatagcaagtggaggatatcactcccttgcattaaccgataat 456
Query: 1003 ggaaaagtgctttcatggggccacggtggacaaggtcagttgggtcatggatctatccag 1062
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 ggaaaagtgctttcatggggccacggtggacaaggtcagttgggtcatggatctatccag 396
Query: 1063 aatcagaagataccaatggtgatcgaggctttagctactgagcatattatatatatttct 1122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 aatcagaagataccaatggtgatcgaggctttagctactgagcatattatatatatttct 336
Query: 1123 tgcgggggctccttttcagcagctgtgacagataaaggaaagttgtacatgtggggaaat 1182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgcgggggctccttttcagcagctgtgacagataaaggaaagttgtacatgtggggaaat 276
Query: 1183 gccagtgattctcaattaggagttcctgggctaccagcgatacaatcatcccctattgaa 1242
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 gccagtgattttcaattaggagttcctgggctaccagcgatacaatcatcccctattgaa 216
Query: 1243 gtcaactttttaatggaagatgatggattgggacctcacaaggttttatcagttgcaact 1302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 gtcaactttttaatggaagatgatggattgggacctcacaaggttttatcagttgcaact 156
Query: 1303 ggtgcgtcacatgccatgtgtttagctttgagggaaagttgttga 1347
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 ggtgcgtcacatgccatgtgtttagctttgagggaaagttgttga 111
>gnl|LJGI|TC70348 similar to UniRef100_A2Q2N3 Cluster: Regulator of chromosome
condensation/beta-lactamase-inhibitor protein II; n=1;
Medicago truncatula|Rep: Regulator of chromosome
condensation/beta-lactamase-inhibitor protein II -
Medicago truncatula (Barrel medic), partial (33%)
Length = 765
Score = 864 bits (436), Expect = 0.0
Identities = 445/447 (99%), Gaps = 2/447 (0%)
Strand = Plus / Plus
Query: 901 aagataggtggttggaaaccaagaccagtacccagccttgagaatgttcgaataattcaa 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagataggtggttggaaaccaagaccagtacccagccttgagaatgttcgaataattcaa 60
Query: 961 atagcaagtggaggatatcactcccttgcattaaccgataatggaaaagtgctttcatgg 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atagcaagtggaggatatcactcccttgcattaaccgataatggaaaagtgctttcatgg 120
Query: 1021 ggccacggtggacaaggtcagttgggtcatggatctatccagaatcagaagataccaatg 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggccacggtggacaaggtcagttgggtcatggatctatccagaatcagaagataccaatg 180
Query: 1081 gtgatcgaggctttagctactgagcatattatatatatttcttgcgggggctccttttca 1140
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 181 gtgatcgaggctttagctactgagcat--tatatatatttcttgcgggggctccttttca 238
Query: 1141 gcagctgtgacagataaaggaaagttgtacatgtggggaaatgccagtgattctcaatta 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 gcagctgtgacagataaaggaaagttgtacatgtggggaaatgccagtgattctcaatta 298
Query: 1201 ggagttcctgggctaccagcgatacaatcatcccctattgaagtcaactttttaatggaa 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 ggagttcctgggctaccagcgatacaatcatcccctattgaagtcaactttttaatggaa 358
Query: 1261 gatgatggattgggacctcacaaggttttatcagttgcaactggtgcgtcacatgccatg 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 gatgatggattgggacctcacaaggttttatcagttgcaactggtgcgtcacatgccatg 418
Query: 1321 tgtttagctttgagggaaagttgttga 1347
|||||||||||||||||||||||||||
Sbjct: 419 tgtttagctttgagggaaagttgttga 445
>gnl|LJGI|BP052920 similar to UniRef100_A2Q2N3 Cluster: Regulator of chromosome
condensation/beta-lactamase-inhibitor protein II; n=1;
Medicago truncatula|Rep: Regulator of chromosome
condensation/beta-lactamase-inhibitor protein II -
Medicago truncatula (Barrel medic), partial (12%)
Length = 524
Score = 311 bits (157), Expect = 6e-84
Identities = 160/161 (99%)
Strand = Plus / Minus
Query: 1187 gtgattctcaattaggagttcctgggctaccagcgatacaatcatcccctattgaagtca 1246
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 524 gtgattctcaattaggagttcctgggctaccagcgatacgatcatcccctattgaagtca 465
Query: 1247 actttttaatggaagatgatggattgggacctcacaaggttttatcagttgcaactggtg 1306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 actttttaatggaagatgatggattgggacctcacaaggttttatcagttgcaactggtg 405
Query: 1307 cgtcacatgccatgtgtttagctttgagggaaagttgttga 1347
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 cgtcacatgccatgtgtttagctttgagggaaagttgttga 364