Miyakogusa Predicted Gene

Lj1g3v3597220.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v3597220.2 Non Chatacterized Hit- tr|C0HE90|C0HE90_MAIZE
Uncharacterized protein OS=Zea mays PE=2 SV=1,49,6e-16, ,CUFF.30958.2
         (321 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC80773 weakly similar to UniRef100_A7R2V3 Cluster: Chr...   620   e-177

>gnl|LJGI|TC80773 weakly similar to UniRef100_A7R2V3 Cluster: Chromosome undetermined
           scaffold_457, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_457,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (69%)
          Length = 1029

 Score =  620 bits (313), Expect = e-177
 Identities = 313/313 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   atggtcgaggaggagctggcaaccgagcctggagtgcttgttgaggaccctagcacggga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 atggtcgaggaggagctggcaaccgagcctggagtgcttgttgaggaccctagcacggga 421

                                                                       
Query: 61  atttctggtgaggacgtattcctcgtcgtaggatcttgggggaagcttctcgagccattc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 atttctggtgaggacgtattcctcgtcgtaggatcttgggggaagcttctcgagccattc 361

                                                                       
Query: 121 ctgggcgatgttgacctcgcagtgagcggagcaagcgtcgatctcttcgaggcggtggga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 ctgggcgatgttgacctcgcagtgagcggagcaagcgtcgatctcttcgaggcggtggga 301

                                                                       
Query: 181 gtcagggtcgacgaggcccttgttgatgagggctttgaggacggtgtggccggagagacc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 gtcagggtcgacgaggcccttgttgatgagggctttgaggacggtgtggccggagagacc 241

                                                                       
Query: 241 aatcacgtcgtgcttcttgccttcgaagtcgatggcggagaagcgcacgatgcggtcgga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 aatcacgtcgtgcttcttgccttcgaagtcgatggcggagaagcgcacgatgcggtcgga 181

                        
Query: 301 gaccttcttggag 313
           |||||||||||||
Sbjct: 180 gaccttcttggag 168