Miyakogusa Predicted Gene

Lj1g3v3580580.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v3580580.1 tr|D7L5W0|D7L5W0_ARALL Predicted protein
OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_899120
PE,32.54,0.000000000005,seg,NULL,CUFF.30903.1
         (451 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO033514 similar to UniRef100_A0R6G6 Cluster: Anti-sigm...   515   e-146

>gnl|LJGI|GO033514 similar to UniRef100_A0R6G6 Cluster: Anti-sigma factor antagonist;
           n=1; Mycobacterium smegmatis str. MC2 155|Rep:
           Anti-sigma factor antagonist - Mycobacterium smegmatis
           (strain ATCC 700084 / mc(2)155), partial (11%)
          Length = 400

 Score =  515 bits (260), Expect = e-146
 Identities = 266/268 (99%)
 Strand = Plus / Plus

                                                                       
Query: 184 gagttcatccttcagatggttattgactccataagtttcataatctcttcagtgtttgat 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gagttcatccttcagatggttattgactccataagtttcataatctcttcagtgtttgat 60

                                                                       
Query: 244 attcttaaagagagcatcacaggatctgtgtctgctacaggatctgtggctggagaactt 303
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 61  attcttaaagagagcatcacaggatctgtgtctgctacaggaactgtggctggagaactt 120

                                                                       
Query: 304 gctgagaaattcaagactacattggaggagtctttaaaccaggtgccagagctatttgag 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gctgagaaattcaagactacattggaggagtctttaaaccaggtgccagagctatttgag 180

                                                                       
Query: 364 gaactctctgacatgatatcaaatatggtgacagaattgtggaacaactacaagggtgct 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gaactctctgacatgatatcaaatatggtgacagaattgtggaacaactacaagggtgct 240

                                       
Query: 424 ttgggatatgttactgagaatgcttgag 451
           |||||||||||||||||||||| |||||
Sbjct: 241 ttgggatatgttactgagaatgtttgag 268