Miyakogusa Predicted Gene
- Lj1g3v3580540.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3580540.1 Non Chatacterized Hit- tr|D8RJ88|D8RJ88_SELML
Putative uncharacterized protein OS=Selaginella
moelle,30.73,0.00000000003,Tetrahydrobiopterin biosynthesis
enzymes-like,NULL; GTP_cyclohydroI,GTP cyclohydrolase I/Nitrile
oxi,CUFF.30896.1
(981 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC80012 similar to UniRef100_A7QEB5 Cluster: Chromosome... 1063 0.0
gnl|LJGI|TC81389 similar to UniRef100_A7QEB5 Cluster: Chromosome... 420 e-117
gnl|LJGI|TC70918 similar to UniRef100_A7QEB5 Cluster: Chromosome... 379 e-104
gnl|LJGI|TC77680 163 3e-39
gnl|LJGI|TC67376 similar to UniRef100_A7QEB5 Cluster: Chromosome... 143 2e-33
gnl|LJGI|BW600173 weakly similar to UniRef100_A7QUB3 Cluster: Ch... 107 1e-22
gnl|LJGI|GO037332 weakly similar to UniRef100_Q8VYU3 Cluster: GT... 80 3e-14
>gnl|LJGI|TC80012 similar to UniRef100_A7QEB5 Cluster: Chromosome chr1 scaffold_84,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_84, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (33%)
Length = 838
Score = 1063 bits (536), Expect = 0.0
Identities = 542/544 (99%)
Strand = Plus / Plus
Query: 1 atgggatgtttggatgatgggagtttcactgttaaacttgaaaatggagctacgaatggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 atgggatgtttggatgatgggagtttcactgttaaacttgaaaatggagctacgaatggt 354
Query: 61 tttgctgaactgagtgtggaggaagaggggaataatgccaccattgaagatgctgtgaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 tttgctgaactgagtgtggaggaagaggggaataatgccaccattgaagatgctgtgaag 414
Query: 121 gttttgttgctgggtcttggggaagacataaacagggaaggtctaagaaagacacctctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 gttttgttgctgggtcttggggaagacataaacagggaaggtctaagaaagacacctctt 474
Query: 181 cgtgttgctaaggcccttcgtgaaggaaccagaggttacaaactaaaggtgaaagacatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 cgtgttgctaaggcccttcgtgaaggaaccagaggttacaaactaaaggtgaaagacatt 534
Query: 241 gttcaaggcgctttattccctgaagctggtctagataatagtgttggacatgcgggcgga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 gttcaaggcgctttattccctgaagctggtctagataatagtgttggacatgcgggcgga 594
Query: 301 gcaggtggacttgtgattgtcagagatcttgacttgttttcctattgcgagtcctgcttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 gcaggtggacttgtgattgtcagagatcttgacttgttttcctattgcgagtcctgcttg 654
Query: 361 cttccgttccaggtcaagtgtcatgtaggttatgttccttccggtggaagagttgttggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 cttccgttccaggtcaagtgtcatgtaggttatgttccttccggtggaagagttgttggt 714
Query: 421 ttaagcaagctctctcgcgttgctgaagtatttgcaaaacggctccaagaacctcagcgt 480
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 ttaagcaagctagctcgcgttgctgaagtatttgcaaaacggctccaagaacctcagcgt 774
Query: 481 cttgcggatgaggtgtgttctgctttgcatctgggaataaagccagcaggtgttgctatc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 cttgcggatgaggtgtgttctgctttgcatctgggaataaagccagcaggtgttgctatc 834
Query: 541 atac 544
||||
Sbjct: 835 atac 838
>gnl|LJGI|TC81389 similar to UniRef100_A7QEB5 Cluster: Chromosome chr1 scaffold_84,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_84, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 1277
Score = 420 bits (212), Expect = e-117
Identities = 215/216 (99%)
Strand = Plus / Plus
Query: 1 atgggatgtttggatgatgggagtttcactgttaaacttgaaaatggagctacgaatggt 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 898 atgggatgtttggacgatgggagtttcactgttaaacttgaaaatggagctacgaatggt 957
Query: 61 tttgctgaactgagtgtggaggaagaggggaataatgccaccattgaagatgctgtgaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 958 tttgctgaactgagtgtggaggaagaggggaataatgccaccattgaagatgctgtgaag 1017
Query: 121 gttttgttgctgggtcttggggaagacataaacagggaaggtctaagaaagacacctctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1018 gttttgttgctgggtcttggggaagacataaacagggaaggtctaagaaagacacctctt 1077
Query: 181 cgtgttgctaaggcccttcgtgaaggaaccagaggt 216
||||||||||||||||||||||||||||||||||||
Sbjct: 1078 cgtgttgctaaggcccttcgtgaaggaaccagaggt 1113
>gnl|LJGI|TC70918 similar to UniRef100_A7QEB5 Cluster: Chromosome chr1 scaffold_84,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_84, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (35%)
Length = 861
Score = 379 bits (191), Expect = e-104
Identities = 203/206 (98%), Gaps = 2/206 (0%)
Strand = Plus / Plus
Query: 776 ccgccaaatccaaaattcaaccagccaatcctgtaatggtctctgcaatagcttcaatta 835
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccgccaaatccaaaattcaaccagccaatcctgtaatggtctctgcaatagcttcaatta 60
Query: 836 ttaaatatttgggagaagatccattgaggaaggagcttacaggaaccccaaggagatttg 895
||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttacat--ttgggagaagatccattgaggaaggagcttacaggaaccccaaggagatttg 118
Query: 896 tgaaatggttaatgaactttcaaaacagtaacttggatatgaagctgaatggttttcttt 955
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 tgaaatggttaatgaactttcaaaacagtaacttggatatgaagctgaatggttttcttt 178
Query: 956 gtagattctgtaaatgtcaataagga 981
||||||||||||||||||||||||||
Sbjct: 179 gtagattctgtaaatgtcaataagga 204
>gnl|LJGI|TC77680
Length = 508
Score = 163 bits (82), Expect = 3e-39
Identities = 82/82 (100%)
Strand = Plus / Plus
Query: 1 atgggatgtttggatgatgggagtttcactgttaaacttgaaaatggagctacgaatggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 atgggatgtttggatgatgggagtttcactgttaaacttgaaaatggagctacgaatggt 479
Query: 61 tttgctgaactgagtgtggagg 82
||||||||||||||||||||||
Sbjct: 480 tttgctgaactgagtgtggagg 501
>gnl|LJGI|TC67376 similar to UniRef100_A7QEB5 Cluster: Chromosome chr1 scaffold_84,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_84, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (11%)
Length = 737
Score = 143 bits (72), Expect = 2e-33
Identities = 135/156 (86%)
Strand = Plus / Plus
Query: 101 ccattgaagatgctgtgaaggttttgttgctgggtcttggggaagacataaacagggaag 160
||||||| |||||||||||||| | ||| |||||||||| ||||| || ||||||||||
Sbjct: 582 ccattgaggatgctgtgaaggtcctcttgttgggtcttggagaagatatcaacagggaag 641
Query: 161 gtctaagaaagacacctcttcgtgttgctaaggcccttcgtgaaggaaccagaggttaca 220
|| | ||||||||||| ||||||||||| ||||| || ||||||||||||||||||||||
Sbjct: 642 gtattagaaagacaccacttcgtgttgccaaggctctccgtgaaggaaccagaggttaca 701
Query: 221 aactaaaggtgaaagacattgttcaaggcgctttat 256
|| ||| ||||| ||||| ||| |||| |||||||
Sbjct: 702 gacaaaaagtgaaggacatagttgaaggtgctttat 737
>gnl|LJGI|BW600173 weakly similar to UniRef100_A7QUB3 Cluster: Chromosome chr11
scaffold_177, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr11 scaffold_177, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (28%)
Length = 476
Score = 107 bits (54), Expect = 1e-22
Identities = 102/118 (86%)
Strand = Plus / Plus
Query: 131 tgggtcttggggaagacataaacagggaaggtctaagaaagacacctcttcgtgttgcta 190
|||||||||| ||||| ||||| | ||||||| | ||||||||||| ||||||||||| |
Sbjct: 356 tgggtcttggagaagatataaaaaaggaaggtattagaaagacaccacttcgtgttgcca 415
Query: 191 aggcccttcgtgaaggaaccagaggttacaaactaaaggtgaaagacattgttcaagg 248
|||| || |||||||||||||||||||||| || ||| ||||| ||||| ||| ||||
Sbjct: 416 aggctctccgtgaaggaaccagaggttacagacaaaaagtgaaggacatagttgaagg 473
>gnl|LJGI|GO037332 weakly similar to UniRef100_Q8VYU3 Cluster: GTP cyclohydrolase I;
n=1; Solanum lycopersicum|Rep: GTP cyclohydrolase I -
Solanum lycopersicum (Tomato) (Lycopersicon esculentum),
partial (7%)
Length = 289
Score = 79.8 bits (40), Expect = 3e-14
Identities = 79/92 (85%)
Strand = Plus / Plus
Query: 613 gtgaagatacttgtttcctcaggttctggggttttcgaaaacaaaaacacagatgtatgg 672
|||| |||||||||||| || |||||||||||||||||||||||||| ||||| ||||
Sbjct: 53 gtgatgatacttgtttcgtccggttctggggttttcgaaaacaaaaatgcagattcatgg 112
Query: 673 gctgatttctttagtcttcttaaatttagagg 704
|| |||||||| |||||||||| ||||||
Sbjct: 113 gcagatttcttcttccttcttaaatctagagg 144