Miyakogusa Predicted Gene

Lj1g3v3580310.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v3580310.1 Non Chatacterized Hit- tr|I1KZ45|I1KZ45_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,34.32,8e-19,FBD,FBD;
seg,NULL,gene.Ljchr1_pseudomol_20120830.path1.gene7910.1
         (840 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV775007                                                      86   4e-16
gnl|LJGI|TC69530                                                       76   4e-13
gnl|LJGI|TC64591 weakly similar to UniRef100_Q2HUI7 Cluster: Cyc...    58   9e-08
gnl|LJGI|TC68402 weakly similar to UniRef100_Q8LF09 Cluster: F-b...    54   1e-06
gnl|LJGI|FS330951 similar to UniRef100_A7QK65 Cluster: Chromosom...    52   6e-06

>gnl|LJGI|AV775007 
          Length = 469

 Score = 85.7 bits (43), Expect = 4e-16
 Identities = 98/115 (85%), Gaps = 1/115 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   aggatttttcttctgtcgatcttccctcactcaaagctctgcatttgaccgctgttaagt 64
           |||||||||||  ||| || ||||||||||||| |||||||||||||| || |||| | |
Sbjct: 439 aggatttttctagtgttgaacttccctcactcacagctctgcatttgaacggtgtttatt 380

                                                                  
Query: 65  tttttaagcctctacatttaa-ttgagcttcttaatggatgtctcaatcttgaaa 118
           |||| ||  ||| |||||||| | |||||||||||||| |||| |||||||||||
Sbjct: 379 ttttcaatgctcaacatttaactggagcttcttaatgggtgtcccaatcttgaaa 325


>gnl|LJGI|TC69530 
          Length = 553

 Score = 75.8 bits (38), Expect = 4e-13
 Identities = 165/207 (79%), Gaps = 9/207 (4%)
 Strand = Plus / Plus

                                                                       
Query: 494 ctgaatgcttttcttcaaagctaagaacctgctttctcacaaaatttacaggcaaaaaat 553
           |||| |||||||||||| ||||  |||||||||||||  ||   || |||||||   | |
Sbjct: 255 ctgagtgcttttcttcacagctccgaacctgctttcttccatgtttcacaggcaccgatt 314

                                                                       
Query: 554 ctgagatgggattttccaagtttgttttgcaaaattcaacattgttaggtaacatgacaa 613
           ||||| |  ||||||||||||||||| ||||||| |||||||||||||||| ||||| ||
Sbjct: 315 ctgagctaagattttccaagtttgttatgcaaaactcaacattgttaggtagcatgaaaa 374

                                                                       
Query: 614 ttttctgcttctatcgcgtatctcgtgatgaaaagaaaatggctgaaatcagaatagaat 673
           || || ||    ||  | |||||| |||      ||||| |||| | || ||||||||||
Sbjct: 375 ttatcggcc---attccctatctcatga------gaaaaaggctaagatgagaatagaat 425

                                      
Query: 674 tagactcatgcccatggagctctgcaa 700
           |||||||||||||| ||||||||||||
Sbjct: 426 tagactcatgcccaaggagctctgcaa 452



 Score = 52.0 bits (26), Expect = 6e-06
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 334 tttcccaatttaattcatatggagct 359
           ||||||||||||||||||||||||||
Sbjct: 98  tttcccaatttaattcatatggagct 123


>gnl|LJGI|TC64591 weakly similar to UniRef100_Q2HUI7 Cluster: Cyclin-like F-box; FBD;
           Zinc finger, FYVE/PHD-type; n=1; Medicago
           truncatula|Rep: Cyclin-like F-box; FBD; Zinc finger,
           FYVE/PHD-type - Medicago truncatula (Barrel medic),
           partial (19%)
          Length = 1534

 Score = 58.0 bits (29), Expect = 9e-08
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                
Query: 195 ttcatttaaggggaaggttaaacctttatcgaacttggtcagagcagatgttt 247
           ||||||| |||||||||||||  ||||||| || ||||| |||||||||||||
Sbjct: 839 ttcatttgaggggaaggttaagactttatccaagttggtaagagcagatgttt 891



 Score = 58.0 bits (29), Expect = 9e-08
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                             
Query: 327  tcctgtttttcccaatttaattcatatggagct 359
            |||||| ||||||||||||||||||||||||||
Sbjct: 989  tcctgtgtttcccaatttaattcatatggagct 1021


>gnl|LJGI|TC68402 weakly similar to UniRef100_Q8LF09 Cluster: F-box/FBD/LRR-repeat
           protein At4g00160; n=2; Arabidopsis thaliana|Rep:
           F-box/FBD/LRR-repeat protein At4g00160 - Arabidopsis
           thaliana (Mouse-ear cress), partial (13%)
          Length = 773

 Score = 54.0 bits (27), Expect = 1e-06
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                      
Query: 9   tttttcttctgtcgatcttccctcactcaaagctctgcatttg 51
           |||||||| ||| |||||||||||||||||| | |||||||||
Sbjct: 475 tttttcttgtgttgatcttccctcactcaaaacactgcatttg 517


>gnl|LJGI|FS330951 similar to UniRef100_A7QK65 Cluster: Chromosome chr19 scaffold_111,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr19 scaffold_111, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (18%)
          Length = 812

 Score = 52.0 bits (26), Expect = 6e-06
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                         
Query: 7   gatttttcttctgtcgatcttccctcactcaaagctctgcatttga 52
           ||||||||  |||| |||||||||||||||||| | ||||||||||
Sbjct: 453 gatttttcaactgtggatcttccctcactcaaaacactgcatttga 498