Miyakogusa Predicted Gene
- Lj1g3v3560250.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3560250.1 Non Chatacterized Hit- tr|B9TDS4|B9TDS4_RICCO
Putative uncharacterized protein (Fragment)
OS=Ricinus,65.82,4e-18,DNA-binding domain,DNA-binding, integrase-type;
DNA-binding domain in plant proteins such as,AP2/ERF,CUFF.30874.1
(702 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC69366 similar to UniRef100_Q56XP9 Cluster: Ethylene-r... 1384 0.0
gnl|LJGI|TC66272 similar to UniRef100_Q56XP9 Cluster: Ethylene-r... 151 7e-36
gnl|LJGI|TC78744 similar to UniRef100_A7R6R9 Cluster: Chromosome... 66 3e-10
>gnl|LJGI|TC69366 similar to UniRef100_Q56XP9 Cluster: Ethylene-responsive
transcription factor-like protein At4g13040; n=1;
Arabidopsis thaliana|Rep: Ethylene-responsive
transcription factor-like protein At4g13040 -
Arabidopsis thaliana (Mouse-ear cress), partial (57%)
Length = 1067
Score = 1384 bits (698), Expect = 0.0
Identities = 701/702 (99%)
Strand = Plus / Plus
Query: 1 atggtaagcttaagaaggcgcaggcttttgggactatgctcaggaagcagttcatttgtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 atggtaagcttaagaaggcgcaggcttttgggactatgctcaggaagcagttcatttgtc 200
Query: 61 actccactccctctgtattgcgagaatctaactggttctgaaaattcaaactggcatgct 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 201 actccactccctctgtattgcgagaatctaactggttctgaaaattcaaactggtatgct 260
Query: 121 aaacctaagagtgaacagcctgtgctttcagacgatgcaagcatcctggacagtaatacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaacctaagagtgaacagcctgtgctttcagacgatgcaagcatcctggacagtaatacc 320
Query: 181 attgtgcaagaagaaccaggttcatcaaatatttctggttcaagctcatcgaaagagcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 attgtgcaagaagaaccaggttcatcaaatatttctggttcaagctcatcgaaagagcag 380
Query: 241 cttatgcaacaaaccccagcaggacctcctgttaaacgtaggaagcgacatagaagaaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttatgcaacaaaccccagcaggacctcctgttaaacgtaggaagcgacatagaagaaag 440
Query: 301 aatttgcacaatcaagagacatgcttaatgagaggtgtctatttcaaaaatatgaaatgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aatttgcacaatcaagagacatgcttaatgagaggtgtctatttcaaaaatatgaaatgg 500
Query: 361 caagcagcaataaaagtggacaagaaacagatccacctagggactgttgggtcacaagag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caagcagcaataaaagtggacaagaaacagatccacctagggactgttgggtcacaagag 560
Query: 421 gaagctgctcatttatatgacagggctgctttcatgtgtgggagggagcccaattttgag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gaagctgctcatttatatgacagggctgctttcatgtgtgggagggagcccaattttgag 620
Query: 481 cttcccgaagaagagaagcgggaattgcacaaattcaaatgggatgaattcttggcagtg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cttcccgaagaagagaagcgggaattgcacaaattcaaatgggatgaattcttggcagtg 680
Query: 541 actcggcaggcaatcacacgtaaaaagcacaagagaaggcttagtccagggccacttgat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 actcggcaggcaatcacacgtaaaaagcacaagagaaggcttagtccagggccacttgat 740
Query: 601 aatggccttgaactgcttccattgcagaaagatgattgggagagtaagcaaggtgtaagt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aatggccttgaactgcttccattgcagaaagatgattgggagagtaagcaaggtgtaagt 800
Query: 661 ggcttctctgcttgtgaaacatcaatctctagaaagtcataa 702
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ggcttctctgcttgtgaaacatcaatctctagaaagtcataa 842
>gnl|LJGI|TC66272 similar to UniRef100_Q56XP9 Cluster: Ethylene-responsive
transcription factor-like protein At4g13040; n=1;
Arabidopsis thaliana|Rep: Ethylene-responsive
transcription factor-like protein At4g13040 -
Arabidopsis thaliana (Mouse-ear cress), partial (24%)
Length = 764
Score = 151 bits (76), Expect = 7e-36
Identities = 292/362 (80%), Gaps = 9/362 (2%)
Strand = Plus / Plus
Query: 1 atggtaagcttaagaaggcgcaggcttttgggactatgctcaggaagcagttcatttgtc 60
||||||||||| || ||||||||||||||||| |||||||||||| || ||| ||||||
Sbjct: 403 atggtaagcttgaggaggcgcaggcttttgggtctatgctcaggagacaattcgtttgtc 462
Query: 61 actccactccctctgtattgcgagaatctaactggttctgaaaattcaaactggcatgct 120
||||| || ||||| || || ||||||||| ||||| ||||||||||| ||||| |
Sbjct: 463 actccgcttcctctatactgtgagaatctagctggtgatgaaaattcaagtcagcatggt 522
Query: 121 aaaccta------agagtgaacagcctgtgctttcagacgatgcaagcatcctggacagt 174
||||||| |||||||||| |||| ||||| || ||||||| |||| ||||||
Sbjct: 523 aaacctaagagacagagtgaacaagctgtactttcggatattgcaagcgtcctagacagt 582
Query: 175 aataccattgtgcaagaagaaccaggttcatcaaatatttctggttcaagctcatcgaaa 234
|||||||||||| |||| ||| |||| ||||||||| |||||||| ||||| || |||
Sbjct: 583 aataccattgtgaaagatgaatcaggatcatcaaatgcatctggttccagctcgtccaaa 642
Query: 235 gagcagcttatgcaacaaaccccagcaggacctcctgttaaacgtaggaagcgacataga 294
||||||| || ||||| | | || || |||||| ||||||| || ||||| ||| |
Sbjct: 643 gagcagcctagtcaacagagcatag-ag--cctcctattaaacgcagaaagcggcattca 699
Query: 295 agaaagaatttgcacaatcaagagacatgcttaatgagaggtgtctatttcaaaaatatg 354
||||| | | ||||||||||| | |||||||||||||| ||||||||||||||||||
Sbjct: 700 agaaaacctatacacaatcaagaaccgtgcttaatgagaggggtctatttcaaaaatatg 759
Query: 355 aa 356
||
Sbjct: 760 aa 761
>gnl|LJGI|TC78744 similar to UniRef100_A7R6R9 Cluster: Chromosome undetermined
scaffold_1399, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_1399,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (19%)
Length = 447
Score = 65.9 bits (33), Expect = 3e-10
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 526 gaattcttggcagtgactcggcaggcaatcacacgtaaaaagcacaagagaaggcttagt 585
|||||||||||| ||||||| |||||||| || ||||||| |||||| |||||| ||||
Sbjct: 5 gaattcttggcaatgactcgacaggcaattaccagtaaaaaacacaagggaaggcatagt 64
Query: 586 ccagg 590
|||||
Sbjct: 65 ccagg 69