Miyakogusa Predicted Gene

Lj1g3v3559210.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v3559210.1 Non Chatacterized Hit- tr|I1JML3|I1JML3_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,81.21,0,Protein
kinase-like (PK-like),Protein kinase-like domain; no description,NULL;
PROTEIN_KINASE_ATP,Pr,CUFF.30871.1
         (1290 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC57526 similar to UniRef100_A7NYZ7 Cluster: Chromosome...    54   2e-06
gnl|LJGI|TC59614 similar to UniRef100_A7PCH6 Cluster: Chromosome...    52   9e-06

>gnl|LJGI|TC57526 similar to UniRef100_A7NYZ7 Cluster: Chromosome chr6 scaffold_3,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr6 scaffold_3, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (74%)
          Length = 1578

 Score = 54.0 bits (27), Expect = 2e-06
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                              
Query: 781 acaggccatctcactgcaaagagtgatgtgtggagttttggtgtagttctt 831
           ||||| ||||||||||| ||||||||||| |  |||||||| |||||||||
Sbjct: 769 acaggtcatctcactgccaagagtgatgtatatagttttggagtagttctt 819


>gnl|LJGI|TC59614 similar to UniRef100_A7PCH6 Cluster: Chromosome chr2 scaffold_11,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr2 scaffold_11, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (78%)
          Length = 1795

 Score = 52.0 bits (26), Expect = 9e-06
 Identities = 77/94 (81%)
 Strand = Plus / Plus

                                                                       
Query: 565 cttggagcggctcaaggattatcgtatctgcatgaaggattagaagttcaggtgatattt 624
           ||||| || |||||||||||| | ||||| ||||| | ||| ||  |||||||||| |  
Sbjct: 795 cttggtgctgctcaaggattagcttatctacatgaggaattggagattcaggtgatctac 854

                                             
Query: 625 cgagattttaaatgttcaaatgtactactggatg 658
            ||||||||||||||||||| || ||| ||||||
Sbjct: 855 agagattttaaatgttcaaacgttctattggatg 888