Miyakogusa Predicted Gene

Lj1g3v3557080.3
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v3557080.3 tr|Q9LNG6|Q9LNG6_ARATH F21D18.14 OS=Arabidopsis
thaliana PE=4 SV=1,40,0.0003, ,CUFF.30862.3
         (324 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC65183 weakly similar to UniRef100_Q9LNG6 Cluster: F21...   196   6e-50

>gnl|LJGI|TC65183 weakly similar to UniRef100_Q9LNG6 Cluster: F21D18.14; n=1;
           Arabidopsis thaliana|Rep: F21D18.14 - Arabidopsis
           thaliana (Mouse-ear cress), partial (35%)
          Length = 1079

 Score =  196 bits (99), Expect = 6e-50
 Identities = 141/155 (90%)
 Strand = Plus / Plus

                                                                       
Query: 7   tggccttctacaagtttctatgattccacgcagtcatacttggttgctaccgatctattt 66
           |||||||||||||   ||||||||||| |  |||||||| |||||||| |||||||||||
Sbjct: 306 tggccttctacaaacctctatgattcctcaaagtcatacatggttgctcccgatctattt 365

                                                                       
Query: 67  tgttgtgtctttagggtgttatggtctattaatggttggagttggtctgatgaattttcc 126
           ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| | 
Sbjct: 366 tgtagtgtctttaggatgttatggtctattaatggttggagttggtctgatgaatttccg 425

                                              
Query: 127 tacatgtcctcaagaagccctcttgttgcagaagg 161
            || |||||||||||||||||||||||||||||||
Sbjct: 426 gacctgtcctcaagaagccctcttgttgcagaagg 460