Miyakogusa Predicted Gene
- Lj1g3v3557030.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3557030.1 tr|F2EFC3|F2EFC3_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2
SV=1,35.12,0.00000000000001,LOW-TEMPERATURE VIABILITY PROTEIN
LTV1-RELATED,NULL; coiled-coil,NULL; seg,NULL,CUFF.30856.1
(1545 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72891 similar to UniRef100_A7NT18 Cluster: Chromosome... 1263 0.0
gnl|LJGI|FS320100 similar to UniRef100_A7NT18 Cluster: Chromosom... 1160 0.0
gnl|LJGI|TC63516 similar to UniRef100_A7NT18 Cluster: Chromosome... 833 0.0
gnl|LJGI|FS334950 similar to UniRef100_A7NT18 Cluster: Chromosom... 710 0.0
gnl|LJGI|TC70145 similar to UniRef100_A7NT18 Cluster: Chromosome... 599 e-170
gnl|LJGI|FS320793 similar to UniRef100_A7NT18 Cluster: Chromosom... 236 3e-61
>gnl|LJGI|TC72891 similar to UniRef100_A7NT18 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (34%)
Length = 1422
Score = 1263 bits (637), Expect = 0.0
Identities = 766/813 (94%), Gaps = 22/813 (2%)
Strand = Plus / Plus
Query: 755 gtgacaaaccgagagctcgtcgtctgttggatgatcaatttgatttacttgaatgtcaag 814
||||||||||||||||||||||| |||||||||| |||||||||||||| ||| ||||||
Sbjct: 1 gtgacaaaccgagagctcgtcgtttgttggatgaacaatttgatttactggaacgtcaag 60
Query: 815 agtatggaaccgacgat---------------------gatggtgaactttatgaaaatt 853
|||||| |||||| ||| |||||||||||||||| |||||
Sbjct: 61 agtatgcaaccgatgattacggtgaagatgatgatgatgatggtgaactttatggaaatt 120
Query: 854 atcaagctgaagatgagttccttgctgagaagctcaaaggctctcttaacaaccatgcga 913
||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||
Sbjct: 121 atcaagctgaagatgagttccttgctgagaagctcaaagcctctcttaacaaccacacga 180
Query: 914 tggacagcctagaacctgatgacgacaagtacagggttcctgcagatttattgaagaaaa 973
||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||
Sbjct: 181 tggacagcctagaacctgatgacgacacttacaaggttcctgcagatttattgaagaaaa 240
Query: 974 acgagaccccaaatagtgaggagcaagaggactttgctgctgatttgattcgccgtatta 1033
| ||| |||||||||| |||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 241 atgaggccccaaatagcgaggagcaagaggactttgctgctgatttgattcgccgtacta 300
Query: 1034 aggaatatggtgaggggtatgacgttgaagatgaagataaggatgttatacttgtcgaag 1093
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||
Sbjct: 301 aggaatatggtgaggggtatgaagttgaagatgaagataaggatgttatacttgtccaag 360
Query: 1094 aaagtagtgatgaatcagaagtttgggattgtgagactattgtttcaacgtactcaaatc 1153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aaagtagtgatgaatcagaagtttgggattgtgagactattgtttcaacgtactcaaatc 420
Query: 1154 tagataaccaccctggtaagattgaagctcctggtgtagctaggaaaaagaaattggctg 1213
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 421 tagataaccaccctggtaagattgaagttcctggtgtagctaggaaaaagaaattggctg 480
Query: 1214 aaacaatgtctgcagccttgaattcctctagtcaaataatatccct-acgcggaaaagag 1272
|||| |||||||||||||||| ||||||||||| |||||| ||||| ||| |||||||||
Sbjct: 481 aaactatgtctgcagccttgagttcctctagtccaataatttccctgacggggaaaagag 540
Query: 1273 aaactccctgtagacttcttgcctgggggtagaaaaccttctaccgaaaaggttaaaggc 1332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aaactccctgtagacttcttgcctgggggtagaaaaccttctaccgaaaaggttaaaggc 600
Query: 1333 ctgagcaatgcaaatactgaacagtacacgagaaaacaacatggcctagagtcaaaggag 1392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ctgagcaatgcaaatactgaacagtacacgagaaaacaacatggcctagagtcaaaggag 660
Query: 1393 gagaagaaagaacgaaaggctgctgtaaaggaggaaaggcgtgaggcacgacgtgttaaa 1452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gagaagaaagaacgaaaggctgctgtaaaggaggaaaggcgtgaggcacgacgtgttaaa 720
Query: 1453 aaagaaatgaaagagctttataagggtgaagcacatcgggcacaaagagctgctgctgta 1512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 aaagaaatgaaagagctttataagggtgaagcacatcgggcacaaagagctgctgctgta 780
Query: 1513 tctggtccttcttccattcatctcatgtaactt 1545
|||||||||||||||||||||||||||||||||
Sbjct: 781 tctggtccttcttccattcatctcatgtaactt 813
>gnl|LJGI|FS320100 similar to UniRef100_A7NT18 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (28%)
Length = 811
Score = 1160 bits (585), Expect = 0.0
Identities = 585/585 (100%)
Strand = Plus / Plus
Query: 1 atggggaagaagaaattcattgacaagaaaaatgctgctactttccaacttattgctcgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 atggggaagaagaaattcattgacaagaaaaatgctgctactttccaacttattgctcgt 286
Query: 61 gactcctcggacccggcattctccacgtcagaccgcgtcttcatccgagtcgacaacaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 gactcctcggacccggcattctccacgtcagaccgcgtcttcatccgagtcgacaacaat 346
Query: 121 cccctttccactgactctatttttgacgatgcccccgaggacattgatgatgatgagagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 cccctttccactgactctatttttgacgatgcccccgaggacattgatgatgatgagagc 406
Query: 181 ctcagtgaaggtgaaggttcgttgccggaggatgtgaggagggaaattctagaactaggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 ctcagtgaaggtgaaggttcgttgccggaggatgtgaggagggaaattctagaactaggg 466
Query: 241 tttccagatgatggatataactacttgaatcatatgagggaaattaagaatactggtggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 tttccagatgatggatataactacttgaatcatatgagggaaattaagaatactggtggt 526
Query: 301 ggttctgctttctttcacaatcccaagttcaagcttcaacacgttcctcatgatattaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 ggttctgctttctttcacaatcccaagttcaagcttcaacacgttcctcatgatattaag 586
Query: 361 gcgtatgatgcttcgagattaccaatttcagaggcggatagagagcctgaggaaaacact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 gcgtatgatgcttcgagattaccaatttcagaggcggatagagagcctgaggaaaacact 646
Query: 421 atatacactgttgcagccaagactaccagcataagggttcagaaagcaattgatcctgaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 atatacactgttgcagccaagactaccagcataagggttcagaaagcaattgatcctgaa 706
Query: 481 gtagctgcgctgcttgatgatactgatttgtcacggtttggttctgatgaagatttggag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 gtagctgcgctgcttgatgatactgatttgtcacggtttggttctgatgaagatttggag 766
Query: 541 gaagactttgttgtacaagctaaccttggtgaggatgaaaatgat 585
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 767 gaagactttgttgtacaagctaaccttggtgaggatgaaaatgat 811
>gnl|LJGI|TC63516 similar to UniRef100_A7NT18 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (25%)
Length = 672
Score = 833 bits (420), Expect = 0.0
Identities = 524/558 (93%), Gaps = 3/558 (0%)
Strand = Plus / Plus
Query: 1 atggggaagaagaaattcattgacaagaaaaatgctgctactttccaacttattgctcgt 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 115 atggggaagaagaaattcattgacaagagaaatgctgctactttccaacttattgctcgt 174
Query: 61 gactcctcggacccggcattctccacgtcagaccgcgtcttcatccgagtcgacaacaat 120
|||||||||||||| ||||||||||| || ||||| |||||| ||||||| |||||||||
Sbjct: 175 gactcctcggacccagcattctccacctcggaccgtgtcttcgtccgagttgacaacaat 234
Query: 121 cccctttccactgactctatttttgacgatgcccccgaggacattgatgatgatgagagc 180
|||||||||| ||||||||||||||| ||||||||||||||| |||||| |||| |||
Sbjct: 235 cccctttccaatgactctatttttgatgatgcccccgaggactgtgatgacaatgacagc 294
Query: 181 ctcagtgaaggtgaaggttcgttgccggaggatgtgaggagggaaattctagaactaggg 240
|||| | | ||||||| ||||||| || ||||||||||||||||||||||||||||||
Sbjct: 295 ctcaacggggatgaaggtgcgttgccagatgatgtgaggagggaaattctagaactaggg 354
Query: 241 tttccagatgatggatataactacttgaatcatatgagggaaattaagaatactggtggt 300
||||| |||||||| |||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 355 tttccggatgatggctataactacttggatcatatgagggaaattaagaatactggtggt 414
Query: 301 ggttctgctttctttcacaatcccaagttcaagcttcaacacgttcctcatgatattaag 360
||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||
Sbjct: 415 ggttctgctttctttaacaaccccaagttcaagcttcaacacgttcctcgtgatattaag 474
Query: 361 gcgtatgatgcttcgagattaccaatttcagaggcggatagagagcctgaggaaaacact 420
|||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||||||
Sbjct: 475 gcgtatgatgcttcgagattacaaatttcagaggcggataaagagcccgaggaaaacact 534
Query: 421 atatacactgttgcagccaagactaccagcataagggttcagaaagcaattgatcctgaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 atatacactgttgcagccaagactaccagcataagggttcagaaagcaattgatcctgaa 594
Query: 481 gtagctgcgctgcttgatgatactgatttgtcacggtttggttctga---tgaagatttg 537
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 595 gtagctgcgctgcttgatgatactgatttgtcacggtttggttctgatgttgaagatttg 654
Query: 538 gaggaagactttgttgta 555
||||||||||||||||||
Sbjct: 655 gaggaagactttgttgta 672
>gnl|LJGI|FS334950 similar to UniRef100_A7NT18 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (20%)
Length = 795
Score = 710 bits (358), Expect = 0.0
Identities = 451/482 (93%)
Strand = Plus / Plus
Query: 1 atggggaagaagaaattcattgacaagaaaaatgctgctactttccaacttattgctcgt 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 314 atggggaagaagaaattcattgacaagagaaatgctgctactttccaacttattgctcgt 373
Query: 61 gactcctcggacccggcattctccacgtcagaccgcgtcttcatccgagtcgacaacaat 120
|||||||||||||| ||||||||||| || ||||| |||||| ||||||| |||||||||
Sbjct: 374 gactcctcggacccagcattctccacctcggaccgtgtcttcgtccgagtggacaacaat 433
Query: 121 cccctttccactgactctatttttgacgatgcccccgaggacattgatgatgatgagagc 180
|||||||||| ||||||||||||||| ||||||||||||||| |||||| |||| |||
Sbjct: 434 cccctttccaatgactctatttttgatgatgcccccgaggactgtgatgacaatgacagc 493
Query: 181 ctcagtgaaggtgaaggttcgttgccggaggatgtgaggagggaaattctagaactaggg 240
|||| | | ||||||| ||||||| || ||||||||||||||||||||||||||||||
Sbjct: 494 ctcaacggggatgaaggtgcgttgccagatgatgtgaggagggaaattctagaactaggg 553
Query: 241 tttccagatgatggatataactacttgaatcatatgagggaaattaagaatactggtggt 300
||||| |||||||| |||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 554 tttccggatgatggctataactacttggatcatatgagggaaattaagaatactggtggt 613
Query: 301 ggttctgctttctttcacaatcccaagttcaagcttcaacacgttcctcatgatattaag 360
||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||
Sbjct: 614 ggttctgctttctttaacaaccccaagttcaagcttcaacacgttcctcgtgatattaag 673
Query: 361 gcgtatgatgcttcgagattaccaatttcagaggcggatagagagcctgaggaaaacact 420
|||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||||||
Sbjct: 674 gcgtatgatgcttcgagattacaaatttcagaggcggataaagagcccgaggaaaacact 733
Query: 421 atatacactgttgcagccaagactaccagcataagggttcagaaagcaattgatcctgaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 atatacactgttgcagccaagactaccagcataagggttcagaaagcaattgatcctgaa 793
Query: 481 gt 482
||
Sbjct: 794 gt 795
>gnl|LJGI|TC70145 similar to UniRef100_A7NT18 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (24%)
Length = 823
Score = 599 bits (302), Expect = e-170
Identities = 359/378 (94%)
Strand = Plus / Plus
Query: 1165 cctggtaagattgaagctcctggtgtagctaggaaaaagaaattggctgaaacaatgtct 1224
||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1 cctgggaagattgaagctcctggtgtagctaggaaaaagaaattggctgaaactatgtct 60
Query: 1225 gcagccttgaattcctctagtcaaataatatccctacgcggaaaagagaaactccctgta 1284
|||||||||| ||||||||||| |||||| ||||| | |||||||||||||||||||||
Sbjct: 61 gcagccttgagttcctctagtccaataatttccctgaggggaaaagagaaactccctgta 120
Query: 1285 gacttcttgcctgggggtagaaaaccttctaccgaaaaggttaaaggcctgagcaatgca 1344
|||||||||||||||| || ||||||| |||| |||||||||||||||| ||||||||||
Sbjct: 121 gacttcttgcctggggctaaaaaacctgctactgaaaaggttaaaggcccgagcaatgca 180
Query: 1345 aatactgaacagtacacgagaaaacaacatggcctagagtcaaaggaggagaagaaagaa 1404
| |||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agtactgagcagtacaagagaaaacaacatggcctagagtcaaaggaggagaagaaagaa 240
Query: 1405 cgaaaggctgctgtaaaggaggaaaggcgtgaggcacgacgtgttaaaaaagaaatgaaa 1464
|||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 241 cgaaaggctgctgtgaaggaggaaaggcgtgaggcacgacgcgttaaaaaagaaatgaaa 300
Query: 1465 gagctttataagggtgaagcacatcgggcacaaagagctgctgctgtatctggtccttct 1524
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 301 gagctttataagggtgaagcacatcgcgcacaaagagctgctgctgtatctggtccttct 360
Query: 1525 tccattcatctcatgtaa 1542
||||||||||||||||||
Sbjct: 361 tccattcatctcatgtaa 378
>gnl|LJGI|FS320793 similar to UniRef100_A7NT18 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 767
Score = 236 bits (119), Expect = 3e-61
Identities = 146/155 (94%)
Strand = Plus / Plus
Query: 1 atggggaagaagaaattcattgacaagaaaaatgctgctactttccaacttattgctcgt 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 613 atggggaagaagaaattcattgacaagagaaatgctgctactttccaacttattgctcgt 672
Query: 61 gactcctcggacccggcattctccacgtcagaccgcgtcttcatccgagtcgacaacaat 120
|||||||||||||| ||||||||||| || ||||| |||||| ||||||| |||||||||
Sbjct: 673 gactcctcggacccagcattctccacctcggaccgtgtcttcgtccgagttgacaacaat 732
Query: 121 cccctttccactgactctatttttgacgatgcccc 155
|||||||||| ||||||||||||||| ||||||||
Sbjct: 733 cccctttccaatgactctatttttgatgatgcccc 767