Miyakogusa Predicted Gene
- Lj1g3v3556890.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3556890.1 Non Chatacterized Hit- tr|I1LWI6|I1LWI6_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,69.41,0.0000000000005,PH domain-like,NULL; HMG-box,High mobility
group, superfamily; high mobility group,High mobility gro,CUFF.30926.1
(1488 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72019 similar to UniRef100_O04235 Cluster: FACT compl... 2413 0.0
gnl|LJGI|GO038073 similar to UniRef100_O04235 Cluster: FACT comp... 293 2e-78
gnl|LJGI|TC69398 similar to UniRef100_O04235 Cluster: FACT compl... 192 4e-48
gnl|LJGI|FS338642 similar to UniRef100_A7PMN7 Cluster: Chromosom... 74 3e-12
gnl|LJGI|TC72950 similar to UniRef100_O04235 Cluster: FACT compl... 58 2e-07
>gnl|LJGI|TC72019 similar to UniRef100_O04235 Cluster: FACT complex subunit SSRP1; n=1;
Vicia faba|Rep: FACT complex subunit SSRP1 - Vicia faba
(Broad bean), partial (64%)
Length = 1815
Score = 2413 bits (1217), Expect = 0.0
Identities = 1224/1225 (99%), Gaps = 1/1225 (0%)
Strand = Plus / Plus
Query: 1 atggcggacgttcatctcttcaacaacatcaccctcgcaggccgcggcggcacgaaagat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 atggcggacgttcatctcttcaacaacatcaccctcgcaggccgcggcggcacgaaagat 127
Query: 61 tcattcagggagaaaagtttccacatgcccaattccaacacccagtatgttagtgatgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 tcattcagggagaaaagtttccacatgcccaattccaacacccagtatgttagtgatgaa 187
Query: 121 ataatgcctatggctgatgttggtgatgaaataatgcctatggctgatgttggtgatgta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ataatgcctatggctgatgttggtgatgaaataatgcctatggctgatgttggtgatgta 247
Query: 181 ataatgcctatggctgatgttggtgatgaaataatgcctatggctgatgttgatgctgga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ataatgcctatggctgatgttggtgatgaaataatgcctatggctgatgttgatgctgga 307
Query: 241 ggtgaagatgctgttgttacatttgagggtattggaatctttacaccaagaggacgttac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 ggtgaagatgctgttgttacatttgagggtattggaatctttacaccaagaggacgttac 367
Query: 301 agtgttgagttacacctctcattcttccgacttagaggaccggctaatgatttcaaaatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 agtgttgagttacacctctcattcttccgacttagaggaccggctaatgatttcaaaatc 427
Query: 361 cagtatagcagtatagttcgcctatatttacttcctaagttaaatcagccacgtactttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 cagtatagcagtatagttcgcctatatttacttcctaagttaaatcagccacgtactttt 487
Query: 421 gtcgttattagtcttgatcctcctattcgggaaggacaaacgttgtaccctcatattgtg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 gtcgttattagtcttgatcctcctattcgggaaggacaaacgttgtaccctcatattgtg 547
Query: 481 atgcagtttgaatctgatttcgttgttcaatgtgaattggcaataaacgaagatctttat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 atgcagtttgaatctgatttcgttgttcaatgtgaattggcaataaacgaagatctttat 607
Query: 541 aacactaagtacaacgacaagttggagctttcttataagggtctgatccatggagtgttc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 aacactaagtacaacgacaagttggagctttcttataagggtctgatccatggagtgttc 667
Query: 601 actacaatattatgtggcttgtctgggtccaaagttacaaagcctggaacatttaggagt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 actacaatattatgtggcttgtctgggtccaaagttacaaagcctggaacatttaggagt 727
Query: 661 tttgtacatggttatgcagtgaaatcatctttgaaagctgaagaaggttatctgtatccc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 tttgtacatggttatgcagtgaaatcatctttgaaagctgaagaaggttatctgtatccc 787
Query: 721 cttgagaagagcttc-ttttttctacctaaacctcccactcttattcttcacgaagagat 779
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788 cttgagaagagcttctttttttctacctaaacctcccactcttattcttcacgaagagat 847
Query: 780 tgactatctgggatttgagcaacatattgcccgtggttcaaaaatatgctattttcacct 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 848 tgactatctgggatttgagcaacatattgcccgtggttcaaaaatatgctattttcacct 907
Query: 840 tctcatcagactaaaatctgagcaagagcatctcttctgcaatattcagagaaatgaatt 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 908 tctcatcagactaaaatctgagcaagagcatctcttctgcaatattcagagaaatgaatt 967
Query: 900 caacaagttgactgcgtttatcatatcaaaggggttaaaattgatggacttaagaagtgc 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 968 caacaagttgactgcgtttatcatatcaaaggggttaaaattgatggacttaagaagtgc 1027
Query: 960 ccatgcccagccagctgttgctttggctcggattcttgggaatgatgatgctgttgatcc 1019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1028 ccatgcccagccagctgttgctttggctcggattcttgggaatgatgatgctgttgatcc 1087
Query: 1020 acatctagagcgcattaaaaatgaagctggtggagatgaaagtgatgaggaggatgaaga 1079
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1088 acatctagagcgcattaaaaatgaagctggtggagatgaaagtgatgaggaggatgaaga 1147
Query: 1080 ttttgttgttgacaaggatgatggaggttctccaactgatgattgtgggggagaaaattc 1139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1148 ttttgttgttgacaaggatgatggaggttctccaactgatgattgtgggggagaaaattc 1207
Query: 1140 tgatgccaacgatggtggggatgagaaagagaagcctgccaaaaagaaaccagagaagga 1199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1208 tgatgccaacgatggtggggatgagaaagagaagcctgccaaaaagaaaccagagaagga 1267
Query: 1200 tctgtctactaaggcatgtacttct 1224
|||||||||||||||||||||||||
Sbjct: 1268 tctgtctactaaggcatgtacttct 1292
Score = 410 bits (207), Expect = e-113
Identities = 207/207 (100%)
Strand = Plus / Plus
Query: 1282 gacccaaatgcacccaagagggcaatgtctggtttcatggtcttttctcaaatggaaaca 1341
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1350 gacccaaatgcacccaagagggcaatgtctggtttcatggtcttttctcaaatggaaaca 1409
Query: 1342 gagaaaactaattctggaatgtcatttacggatgtggggaaagtacttggagagaaatgg 1401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1410 gagaaaactaattctggaatgtcatttacggatgtggggaaagtacttggagagaaatgg 1469
Query: 1402 aaaaagatgtcagcggaggataaagaaccatacgaggcaaaagctgcccgggatgataag 1461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1470 aaaaagatgtcagcggaggataaagaaccatacgaggcaaaagctgcccgggatgataag 1529
Query: 1462 aaattttatatggatgaagattagtgg 1488
|||||||||||||||||||||||||||
Sbjct: 1530 aaattttatatggatgaagattagtgg 1556
>gnl|LJGI|GO038073 similar to UniRef100_O04235 Cluster: FACT complex subunit SSRP1; n=1;
Vicia faba|Rep: FACT complex subunit SSRP1 - Vicia faba
(Broad bean), partial (37%)
Length = 831
Score = 293 bits (148), Expect = 2e-78
Identities = 199/216 (92%)
Strand = Plus / Minus
Query: 1001 atgatgatgctgttgatccacatctagagcgcattaaaaatgaagctggtggagatgaaa 1060
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 atgatgatgctgttgatccacatctagagcgcattaaaaatgaagctggtggagatgaaa 609
Query: 1061 gtgatgaggaggatgaagattttgttgttgacaaggatgatggaggttctccaactgatg 1120
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 608 gtgatgaggaggatgaagattttgttgttgacaaggatgatggtggttctccaactgatg 549
Query: 1121 attgtgggggagaaaattctgatgccaacgatggtggggatgagaaagagaagcctgcca 1180
| | ||| || ||| |||||||||| | ||| |||| ||||||||||||||||||||||
Sbjct: 548 agtctggtggggaagattctgatgctagtgatagtggtgatgagaaagagaagcctgcca 489
Query: 1181 aaaagaaaccagagaaggatctgtctactaaggcat 1216
|| | ||||| |||||| ||||||| |||||||||
Sbjct: 488 aagtggaaccaaagaaggttctgtcttctaaggcat 453
Score = 208 bits (105), Expect = 7e-53
Identities = 155/173 (89%), Gaps = 9/173 (5%)
Strand = Plus / Minus
Query: 1282 gacccaaatgcacccaagagggcaatgtctggtttcatggtcttttctcaaatggaaaca 1341
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
Sbjct: 386 gacccaaatgcacccaagagggcaatgtctggtttcatgttcttttctcaaatggaaaga 327
Query: 1342 gagaa---------aactaattctggaatgtcatttacggatgtggggaaagtacttgga 1392
||||| ||||||| ||||||| ||||||||||||||||||| ||||||||||
Sbjct: 326 gagaatctgaagaaaactaatcctggaatttcatttacggatgtggggagagtacttgga 267
Query: 1393 gagaaatggaaaaagatgtcagcggaggataaagaaccatacgaggcaaaagc 1445
||||||||||| ||||| ||||||||||||||||| ||||| |||||||||||
Sbjct: 266 gagaaatggaagaagatatcagcggaggataaagagccatatgaggcaaaagc 214
>gnl|LJGI|TC69398 similar to UniRef100_O04235 Cluster: FACT complex subunit SSRP1; n=1;
Vicia faba|Rep: FACT complex subunit SSRP1 - Vicia faba
(Broad bean), partial (26%)
Length = 626
Score = 192 bits (97), Expect = 4e-48
Identities = 153/173 (88%), Gaps = 9/173 (5%)
Strand = Plus / Plus
Query: 1282 gacccaaatgcacccaagagggcaatgtctggtttcatggtcttttctcaaatggaaaca 1341
||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |
Sbjct: 232 gacccaaatgcacccaagagggcaatgtctggtttcatgttcttttcgcaaatggaaaga 291
Query: 1342 gagaa---------aactaattctggaatgtcatttacggatgtggggaaagtacttgga 1392
||||| ||||||| ||||||| |||||||||||||| |||| ||||||||||
Sbjct: 292 gagaatctaaagaaaactaatcctggaatttcatttacggatgttgggagagtacttgga 351
Query: 1393 gagaaatggaaaaagatgtcagcggaggataaagaaccatacgaggcaaaagc 1445
||||||||||||||||||||| ||||||| ||||||||||| |||| ||||||
Sbjct: 352 gagaaatggaaaaagatgtcaacggaggagaaagaaccatatgaggtaaaagc 404
Score = 188 bits (95), Expect = 7e-47
Identities = 152/171 (88%)
Strand = Plus / Plus
Query: 1054 gatgaaagtgatgaggaggatgaagattttgttgttgacaaggatgatggaggttctcca 1113
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1 gatgaaagtgatgaggaggatgaagattttgttcctgacaaggatgatggaggttctcct 60
Query: 1114 actgatgattgtgggggagaaaattctgatgccaacgatggtggggatgagaaagagaag 1173
|||||||||| |||||| || ||||||||| | ||| |||| |||||||||||||||
Sbjct: 61 actgatgattctgggggggatgattctgatggtagtgatagtggtgatgagaaagagaag 120
Query: 1174 cctgccaaaaagaaaccagagaaggatctgtctactaaggcatgtacttct 1224
|||||||||||| ||||| ||||||||||| || || |||||| |||||||
Sbjct: 121 cctgccaaaaaggaaccaaagaaggatctgccttctgaggcatctacttct 171
>gnl|LJGI|FS338642 similar to UniRef100_A7PMN7 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 256
Score = 73.8 bits (37), Expect = 3e-12
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 12 tcatctcttcaacaacatcaccctcgcaggccgcggcggcacgaa 56
|||||||||||||||||||||| ||| ||||||||||||||||||
Sbjct: 102 tcatctcttcaacaacatcaccgtcggaggccgcggcggcacgaa 146
>gnl|LJGI|TC72950 similar to UniRef100_O04235 Cluster: FACT complex subunit SSRP1;
n=1; Vicia faba|Rep: FACT complex subunit SSRP1 - Vicia
faba (Broad bean), partial (31%)
Length = 698
Score = 58.0 bits (29), Expect = 2e-07
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 20 tcaacaacatcaccctcgcaggccgcggcggcacgaa 56
|||||||||||||||||| |||||||||||||||||
Sbjct: 115 tcaacaacatcaccctcggcggccgcggcggcacgaa 151
Score = 56.0 bits (28), Expect = 7e-07
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 54 gaaagattcattcagggagaaaagtttccacatgcccaattccaacacccagtatgttag 113
|||||||||||| | |||| ||||||||| || || |||||||| |||||||||||| |
Sbjct: 578 gaaagattcattgatggagttaagtttccatataccaaattccaatacccagtatgttgg 637
Query: 114 tgatgaaa 121
|||||||
Sbjct: 638 cgatgaaa 645