Miyakogusa Predicted Gene

Lj1g3v3542650.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v3542650.1 tr|G7J0V1|G7J0V1_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula
GN=MTR_3g0,48.98,4e-19,PPR: pentatricopeptide repeat
domain,Pentatricopeptide repeat; PPR,Pentatricopeptide repeat;
PPR_2,P,CUFF.30914.1
         (294 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC60893 similar to UniRef100_A7QAE1 Cluster: Chromosome...   583   e-166

>gnl|LJGI|TC60893 similar to UniRef100_A7QAE1 Cluster: Chromosome undetermined
           scaffold_70, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_70, whole
           genome shotgun sequence - Vitis vinifera (Grape),
           partial (42%)
          Length = 717

 Score =  583 bits (294), Expect = e-166
 Identities = 294/294 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggagtatttgtttagactaatgcggtcagagagaataaaacccagttgtgttacactg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 atggagtatttgtttagactaatgcggtcagagagaataaaacccagttgtgttacactg 362

                                                                       
Query: 61  tgctctcttgtgagggcttatgcacgtgcaggtaaacctgaaaaaattggtggtgtcctg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 tgctctcttgtgagggcttatgcacgtgcaggtaaacctgaaaaaattggtggtgtcctg 422

                                                                       
Query: 121 cgttttgttgagaactcagatgtattactggacaccgtattctttaattgcttagtggat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 cgttttgttgagaactcagatgtattactggacaccgtattctttaattgcttagtggat 482

                                                                       
Query: 181 gcttatgggaggttagggtgtcttgctgagatgaagggagtgcttgaaataatggaacaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 gcttatgggaggttagggtgtcttgctgagatgaagggagtgcttgaaataatggaacaa 542

                                                                 
Query: 241 agatgttgtaaacccgatgttgtaacttacagaaccatgattaaagcttattca 294
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 agatgttgtaaacccgatgttgtaacttacagaaccatgattaaagcttattca 596