Miyakogusa Predicted Gene

Lj1g3v3508280.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v3508280.1 tr|B9GNJ5|B9GNJ5_POPTR Predicted protein
(Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_851473
PE=4,48.15,2e-16, ,CUFF.30812.1
         (441 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS336722 weakly similar to UniRef100_A7QA95 Cluster: Ch...   829   0.0  
gnl|LJGI|TC67935 weakly similar to UniRef100_A7QA95 Cluster: Chr...   620   e-177

>gnl|LJGI|FS336722 weakly similar to UniRef100_A7QA95 Cluster: Chromosome undetermined
           scaffold_70, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_70, whole
           genome shotgun sequence - Vitis vinifera (Grape),
           partial (10%)
          Length = 643

 Score =  829 bits (418), Expect = 0.0
 Identities = 418/418 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcagaatgcgtggcctcccctttcggcattaagctgaatatacagagaaatcctgtt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 atggcagaatgcgtggcctcccctttcggcattaagctgaatatacagagaaatcctgtt 285

                                                                       
Query: 61  agagagagaggcttctcgcgtcattctgcaaatttcagcacagttggaagaaagtattcc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 agagagagaggcttctcgcgtcattctgcaaatttcagcacagttggaagaaagtattcc 345

                                                                       
Query: 121 agaaatggatgtcaatttcttcacttctcttcatggaaaacatgtgagctcagtgtattt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 agaaatggatgtcaatttcttcacttctcttcatggaaaacatgtgagctcagtgtattt 405

                                                                       
Query: 181 agggccatagatttgaaaattactccttgtatgcggacaatccctttgaagtgcactggc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 agggccatagatttgaaaattactccttgtatgcggacaatccctttgaagtgcactggc 465

                                                                       
Query: 241 ttaggggctttggttgacttcaatggcgcggcatcctctggtttggtgccggttgttgat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 ttaggggctttggttgacttcaatggcgcggcatcctctggtttggtgccggttgttgat 525

                                                                       
Query: 301 caggttcttttgatgggcagtatatttctcacttatatggctggagtaatccctgttgag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 caggttcttttgatgggcagtatatttctcacttatatggctggagtaatccctgttgag 585

                                                                     
Query: 361 aaatcttataccaattatcaaaagatcgattctgataaaaatgtgtttcctgagagct 418
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 aaatcttataccaattatcaaaagatcgattctgataaaaatgtgtttcctgagagct 643


>gnl|LJGI|TC67935 weakly similar to UniRef100_A7QA95 Cluster: Chromosome undetermined
           scaffold_70, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_70, whole
           genome shotgun sequence - Vitis vinifera (Grape),
           partial (10%)
          Length = 605

 Score =  620 bits (313), Expect = e-177
 Identities = 313/313 (100%)
 Strand = Plus / Plus

                                                                       
Query: 122 gaaatggatgtcaatttcttcacttctcttcatggaaaacatgtgagctcagtgtattta 181
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2   gaaatggatgtcaatttcttcacttctcttcatggaaaacatgtgagctcagtgtattta 61

                                                                       
Query: 182 gggccatagatttgaaaattactccttgtatgcggacaatccctttgaagtgcactggct 241
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62  gggccatagatttgaaaattactccttgtatgcggacaatccctttgaagtgcactggct 121

                                                                       
Query: 242 taggggctttggttgacttcaatggcgcggcatcctctggtttggtgccggttgttgatc 301
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 taggggctttggttgacttcaatggcgcggcatcctctggtttggtgccggttgttgatc 181

                                                                       
Query: 302 aggttcttttgatgggcagtatatttctcacttatatggctggagtaatccctgttgaga 361
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 aggttcttttgatgggcagtatatttctcacttatatggctggagtaatccctgttgaga 241

                                                                       
Query: 362 aatcttataccaattatcaaaagatcgattctgataaaaatgtgtttcctgagagctcag 421
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 aatcttataccaattatcaaaagatcgattctgataaaaatgtgtttcctgagagctcag 301

                        
Query: 422 acaattctggtag 434
           |||||||||||||
Sbjct: 302 acaattctggtag 314