Miyakogusa Predicted Gene
- Lj1g3v3478250.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3478250.1 Non Chatacterized Hit- tr|K4CAK8|K4CAK8_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,81.74,0,SYNAPTOBREVIN,Synaptobrevin; no description,Longin
domain; no description,NULL; seg,NULL; SYNAPTOBRE,CUFF.30808.1
(669 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC74310 similar to UniRef100_P47192 Cluster: Vesicle-as... 521 e-147
gnl|LJGI|GO023541 similar to UniRef100_A7QKU3 Cluster: Chromosom... 222 2e-57
gnl|LJGI|TC66535 similar to UniRef100_A7QKU3 Cluster: Chromosome... 165 4e-40
gnl|LJGI|TC62632 similar to UniRef100_A7QTI2 Cluster: Chromosome... 129 2e-29
gnl|LJGI|BP048976 homologue to UniRef100_A7QKU3 Cluster: Chromos... 127 1e-28
gnl|LJGI|TC69093 similar to UniRef100_A7QKU3 Cluster: Chromosome... 125 4e-28
gnl|LJGI|AV417281 similar to UniRef100_A7QTI2 Cluster: Chromosom... 66 3e-10
gnl|LJGI|TC61866 similar to UniRef100_A7QL20 Cluster: Chromosome... 64 1e-09
gnl|LJGI|TC73886 similar to UniRef100_O23429 Cluster: Vesicle-as... 52 5e-06
>gnl|LJGI|TC74310 similar to UniRef100_P47192 Cluster: Vesicle-associated membrane
protein 722; n=1; Arabidopsis thaliana|Rep:
Vesicle-associated membrane protein 722 - Arabidopsis
thaliana (Mouse-ear cress), partial (40%)
Length = 634
Score = 521 bits (263), Expect = e-147
Identities = 269/271 (99%)
Strand = Plus / Plus
Query: 399 agtgaaagctcaggtttctgaagtcaaaggagttatgatggaaaatattgagaaggttct 458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 agtgaaagctcaggtttctgaagtcaaaggagttatgatggaaaatattgagaaggttct 61
Query: 459 tgaccgtggggagaaaattgagcttttggtggataaaacagataaccttcgctctcaggc 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 tgaccgtggggagaaaattgagcttttggtggataaaacagataaccttcgctctcaggc 121
Query: 519 acaagatttcaggcaacagggaaccaagattaggagaaagatgtggttccaaaatatgaa 578
||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||
Sbjct: 122 acaagatttcaggcaacagggaacccagattaggagaaagatgtggttcccaaatatgaa 181
Query: 579 gatcaagttaattgttgcgggtatcatagttctcttgattctcattctcattatctccat 638
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gatcaagttaattgttgcgggtatcatagttctcttgattctcattctcattatctccat 241
Query: 639 ttgtggtagcttaaattgtagtaagaaatga 669
|||||||||||||||||||||||||||||||
Sbjct: 242 ttgtggtagcttaaattgtagtaagaaatga 272
>gnl|LJGI|GO023541 similar to UniRef100_A7QKU3 Cluster: Chromosome undetermined
scaffold_114, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_114,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (90%)
Length = 770
Score = 222 bits (112), Expect = 2e-57
Identities = 398/492 (80%), Gaps = 1/492 (0%)
Strand = Plus / Plus
Query: 103 tgccttcagaaactcccttcctccaacaataagttcacgtaccactgcgacggccacaca 162
|||||||||||||| ||||| ||||| || | ||||| ||| | || || ||||||||
Sbjct: 199 tgccttcagaaacttccttcttccaataacagattcacttacaattgtgatggccacacg 258
Query: 163 ttccactaccttgtggattatggattcacttactgtgtcgttgcgattgagtctgctgga 222
||| | |||||||| || |||| |||||||||||||| || || |||| ||||||||
Sbjct: 259 ttcaattaccttgttgaaaatggcttcacttactgtgtggtcgcagttgaatctgctggt 318
Query: 223 cgacagattccaattgcattccttgaacgtattaaggaggagttcaccaagaaatatgct 282
||||||| || ||||| || || || ||| | ||||| || |||| ||| || |||| |
Sbjct: 319 agacagatccctattgcctttctagagcgtgtcaaggaagaattcagcaaaaagtatggt 378
Query: 283 ggaggaaaagcagcaaatgctgctgctcagagcctgaaaagagagtttggacctaagttg 342
||||| ||||| |||| |||| | |||| ||||| || | ||| ||||| ||||| |||
Sbjct: 379 ggaggcaaagctgcaactgcttcaactcacagcctaaacaaagaatttgggcctaaattg 438
Query: 343 aaggagcagatgcagtactgtattgatcacccagaggagattagcaagctttctaaagtg 402
||| | || ||||| || ||| ||||||| || || ||||| ||||||||| | ||||||
Sbjct: 439 aagcaacaaatgcaatattgtgttgatcatcctgaagagatcagcaagcttgccaaagtg 498
Query: 403 aaagctcaggtttctgaagtcaaaggagttatgatggaaaatattgagaaggttcttgac 462
|| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 499 aaggctcaagtttctgaagtcaaaggagttatgatggaaaacattgagaaggttcttgac 558
Query: 463 cgtggggagaaaattgagcttttggtggataaaacagataaccttcgctctcaggcacaa 522
||||| || || |||||| | || ||||| || || || |||||||| || |||||||||
Sbjct: 559 cgtggagaaaagattgagatgttagtggacaagactgacaaccttcgatcacaggcacaa 618
Query: 523 gatttcaggcaacagggaaccaagattaggagaaagatgtggttccaaaatatgaagatc 582
||||| || |||||| || ||||| | || |||||||| | || ||||||||||||
Sbjct: 619 gattttagaacacagggcacaaagatgaaaag-gagatgtgggttcacaatatgaagatc 677
Query: 583 aagttaattgtt 594
||||| ||||||
Sbjct: 678 aagttgattgtt 689
>gnl|LJGI|TC66535 similar to UniRef100_A7QKU3 Cluster: Chromosome undetermined
scaffold_114, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_114,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (65%)
Length = 722
Score = 165 bits (83), Expect = 4e-40
Identities = 365/455 (80%), Gaps = 3/455 (0%)
Strand = Plus / Plus
Query: 1 atgggacagcaatcgttgatctacagcttcgtcgctcgcggcaccgtgatcctcgctgag 60
||||| |||||||| ||||||||||||||||| || ||||| || ||||||| || |||
Sbjct: 245 atggggcagcaatctttgatctacagcttcgtggcgcgcgggacgttgatcctggcggag 304
Query: 61 tacaccgagttcaccggaaacttcaccggcgtggcggcgcagtgccttcagaaactccct 120
||||| || |||| ||| ||||||||| || | || ||||||||| || || ||||||
Sbjct: 305 tacacagacttcaacgggaacttcaccagcatagctttgcagtgcctccaaaagctccct 364
Query: 121 tcctccaacaataagttcacgtaccactgcgacggccacacattccactaccttgtggat 180
|||||||||| |||||||| || |||| || || ||||| ||| ||||| || ||
Sbjct: 365 gcctccaacaagaagttcacttataactgtgatggacacaccttcagttacctcgttgac 424
Query: 181 tatggattcacttactgtgtcgttgcgattgagtctgctggacgacagattccaattgca 240
|||||||||||||||| || || || | ||||| ||| | |||||||||||| ||
Sbjct: 425 aatggattcacttactgcgtggtggcagtggagtcctttggtcaacagattccaatggcc 484
Query: 241 ttccttgaacgtattaaggaggagttcaccaagaaatatgctggaggaaaagcagcaaat 300
|| ||||||||||| |||||||| || || || |||||||| ||||||| ||| |||
Sbjct: 485 tttcttgaacgtatcaaggaggattttactaaaaaatatgcaggaggaagagcttcaaca 544
Query: 301 gctgctgctcagagcctgaaaagagagtttggacctaagttgaaggagcagatgcagtac 360
|| ||||| | || || || | ||| ||||| || ||| |||||||||| |||||||||
Sbjct: 545 gcagctgcaaaaagtcttaacaaagaatttgggccaaagctgaaggagcaaatgcagtac 604
Query: 361 tgtattgatcacccagaggagattagcaagctttctaaagtgaaagctcaggtttctgaa 420
||| | || || ||||||||| ||| ||| ||| |||||||||||||||| ||||||| |
Sbjct: 605 tgtgtggagcatccagaggaggttaacaaacttgctaaagtgaaagctcaagtttctg-a 663
Query: 421 gtcaaaggagttatgatggaaaatattgagaaggt 455
||||||| || |||||||| ||||||||| |||||
Sbjct: 664 gtcaaagaag-tatgatgg-aaatattgaaaaggt 696
>gnl|LJGI|TC62632 similar to UniRef100_A7QTI2 Cluster: Chromosome undetermined
scaffold_168, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_168,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (96%)
Length = 1027
Score = 129 bits (65), Expect = 2e-29
Identities = 137/161 (85%)
Strand = Plus / Plus
Query: 328 tttggacctaagttgaaggagcagatgcagtactgtattgatcacccagaggagattagc 387
||||| || ||||||||||| || |||||||||||| ||||||| || || ||| |||||
Sbjct: 510 tttgggcccaagttgaaggaacacatgcagtactgtgttgatcatcctgaagaggttagc 569
Query: 388 aagctttctaaagtgaaagctcaggtttctgaagtcaaaggagttatgatggaaaatatt 447
||||| | || ||||||||||||||||||||||| ||||| || |||||||| ||||||
Sbjct: 570 aagctggcaaaggtgaaagctcaggtttctgaagttaaaggtgtcatgatggagaatatt 629
Query: 448 gagaaggttcttgaccgtggggagaaaattgagcttttggt 488
|| |||||||| ||| | ||||| || ||||||||| ||||
Sbjct: 630 gaaaaggttctggacaggggggaaaagattgagcttctggt 670
>gnl|LJGI|BP048976 homologue to UniRef100_A7QKU3 Cluster: Chromosome undetermined
scaffold_114, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_114,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (52%)
Length = 568
Score = 127 bits (64), Expect = 1e-28
Identities = 130/152 (85%)
Strand = Plus / Minus
Query: 337 aagttgaaggagcagatgcagtactgtattgatcacccagaggagattagcaagctttct 396
||||||||||| || |||||||||||| ||||||| || || ||| |||||||||| |
Sbjct: 450 aagttgaaggaacacatgcagtactgtgttgatcatcctgaagaggttagcaagctggca 391
Query: 397 aaagtgaaagctcaggtttctgaagtcaaaggagttatgatggaaaatattgagaaggtt 456
|| ||||||||||||||||||||||| ||||| || |||||||| |||||||| ||||||
Sbjct: 390 aaggtgaaagctcaggtttctgaagttaaaggtgtcatgatggagaatattgaaaaggtt 331
Query: 457 cttgaccgtggggagaaaattgagcttttggt 488
|| ||| | ||||| || ||||||||| ||||
Sbjct: 330 ctggacaggggggaaaagattgagcttctggt 299
>gnl|LJGI|TC69093 similar to UniRef100_A7QKU3 Cluster: Chromosome undetermined
scaffold_114, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_114,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (97%)
Length = 1145
Score = 125 bits (63), Expect = 4e-28
Identities = 159/191 (83%)
Strand = Plus / Plus
Query: 340 ttgaaggagcagatgcagtactgtattgatcacccagaggagattagcaagctttctaaa 399
|||||||| || |||||||||||| ||||||| || || ||||| ||||||||| | ||
Sbjct: 515 ttgaaggaacatatgcagtactgtgttgatcatcctgaagagataagcaagcttgcaaag 574
Query: 400 gtgaaagctcaggtttctgaagtcaaaggagttatgatggaaaatattgagaaggttctt 459
||||||||||||||||||||||| ||||| || |||||||| ||||| || ||||||||
Sbjct: 575 gtgaaagctcaggtttctgaagttaaaggtgtcatgatggagaatatagaaaaggttctg 634
Query: 460 gaccgtggggagaaaattgagcttttggtggataaaacagataaccttcgctctcaggca 519
||| | || || || || |||||||||||||| || || || ||||||| ||||||
Sbjct: 635 gacaggggtgaaaagatagagcttttggtggacaagactgagaaccttcatcaccaggca 694
Query: 520 caagatttcag 530
|||||||||||
Sbjct: 695 caagatttcag 705
>gnl|LJGI|AV417281 similar to UniRef100_A7QTI2 Cluster: Chromosome undetermined
scaffold_168, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_168,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (49%)
Length = 423
Score = 65.9 bits (33), Expect = 3e-10
Identities = 225/289 (77%)
Strand = Plus / Plus
Query: 10 caatcgttgatctacagcttcgtcgctcgcggcaccgtgatcctcgctgagtacaccgag 69
|||||| |||| ||||||||||| || || || || |||||||| || ||| |||||||
Sbjct: 105 caatcgctgatatacagcttcgtggcgcgtgggactgtgatcctggcagagcacaccgac 164
Query: 70 ttcaccggaaacttcaccggcgtggcggcgcagtgccttcagaaactcccttcctccaac 129
||| |||||||||| | ||||||| |||| | | ||||| || || || |||||
Sbjct: 165 ttcgtcggaaacttcggggacgtggcgttacagttcttgcagaagcttccatcatccaat 224
Query: 130 aataagttcacgtaccactgcgacggccacacattccactaccttgtggattatggattc 189
| |||||||| ||| || |||||||||||| ||| ||||||| || | ||||||||
Sbjct: 225 accaagttcacatacaacaccgacggccacaccttcaactacctcgtccacaatggattc 284
Query: 190 acttactgtgtcgttgcgattgagtctgctggacgacagattccaattgcattccttgaa 249
||||| ||||| || || | |||||| |||| || |||||| |||| || || ||||||
Sbjct: 285 acttattgtgttgtggcagtggagtctactggtcgccagattgcaatggcctttcttgaa 344
Query: 250 cgtattaaggaggagttcaccaagaaatatgctggaggaaaagcagcaa 298
|| || ||||| || || || |||| ||||| |||||| ||||| ||||
Sbjct: 345 cgcatcaaggaagattttacaaagagatatgatggaggcaaagctgcaa 393
>gnl|LJGI|TC61866 similar to UniRef100_A7QL20 Cluster: Chromosome undetermined
scaffold_116, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_116,
whole genome shotgun sequence - Vitis vinifera (Grape),
complete
Length = 1224
Score = 63.9 bits (32), Expect = 1e-09
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 433 atgatggaaaatattgagaaggttcttgaccgtggggagaaaattgagcttttggtggat 492
|||||||| ||||||||||||||| | || ||||| ||||||||||| ||| |||| ||
Sbjct: 740 atgatggataatattgagaaggttttggatcgtggagagaaaattgaacttctggtagac 799
Query: 493 aaaacaga 500
||||||||
Sbjct: 800 aaaacaga 807
>gnl|LJGI|TC73886 similar to UniRef100_O23429 Cluster: Vesicle-associated membrane
protein 724; n=1; Arabidopsis thaliana|Rep:
Vesicle-associated membrane protein 724 - Arabidopsis
thaliana (Mouse-ear cress), partial (98%)
Length = 919
Score = 52.0 bits (26), Expect = 5e-06
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 11 aatcgttgatctacagcttcgtcgctcgcggcaccgtgatcctcgctgagtacaccgagt 70
||||||| || ||||||||||| ||||| || || || | || ||||||||||||||||
Sbjct: 71 aatcgttcatatacagcttcgtggctcgtgggacgatggtgctagctgagtacaccgagt 130
Query: 71 tcaccggaaacttc 84
|||| || ||||||
Sbjct: 131 tcactgggaacttc 144