Miyakogusa Predicted Gene
- Lj1g3v3478240.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3478240.1 Non Chatacterized Hit- tr|I3S0C9|I3S0C9_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,100,0,no
description,Tetratricopeptide-like helical; GLR1902 PROTEIN,NULL;
TETRATRICOPEPTIDE REPEAT PROTEI,CUFF.30809.1
(555 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60030 similar to UniRef100_A7QKT8 Cluster: Chromosome... 1100 0.0
gnl|LJGI|BW594414 similar to UniRef100_A7QKT8 Cluster: Chromosom... 194 4e-49
gnl|LJGI|FS335428 homologue to UniRef100_A7QDV0 Cluster: Chromos... 60 2e-08
gnl|LJGI|BP040489 homologue to UniRef100_A7QDU7 Cluster: Chromos... 52 4e-06
>gnl|LJGI|TC60030 similar to UniRef100_A7QKT8 Cluster: Chromosome undetermined
scaffold_114, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_114,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (87%)
Length = 1177
Score = 1100 bits (555), Expect = 0.0
Identities = 555/555 (100%)
Strand = Plus / Plus
Query: 1 atgaaagaacgaagtggtggtggttgcagcaactacaattacaattgctcaaaagggaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 atgaaagaacgaagtggtggtggttgcagcaactacaattacaattgctcaaaagggaaa 128
Query: 61 aaagatgactcttatcatgtacttcataaggttccttatggagatactccttatgtcaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 aaagatgactcttatcatgtacttcataaggttccttatggagatactccttatgtcaga 188
Query: 121 gctaaacatgctcagctggttgagaaggacccggagggtgctattgcattattttggagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 gctaaacatgctcagctggttgagaaggacccggagggtgctattgcattattttggagg 248
Query: 181 gcaataaacacaggggacaaagtggacagtgcattgaaggatatggcagtggtgatgaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 gcaataaacacaggggacaaagtggacagtgcattgaaggatatggcagtggtgatgaag 308
Query: 241 caattagacagatctgaagaagccattgaagctatttgttcatttagaggactatgctcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 caattagacagatctgaagaagccattgaagctatttgttcatttagaggactatgctcc 368
Query: 301 aaacaatcccaagagtcccttgataatgtgcttatagatctttacaagaaatgtggaaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 aaacaatcccaagagtcccttgataatgtgcttatagatctttacaagaaatgtggaaag 428
Query: 361 atagatgagcaaatagaattgttgaagagaaagctgaagttgatttatgaaggcgaggca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 atagatgagcaaatagaattgttgaagagaaagctgaagttgatttatgaaggcgaggca 488
Query: 421 ttcaatgggaagctcacaaagacagcacggtcccatggcaagaagtttcaagtttctatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 ttcaatgggaagctcacaaagacagcacggtcccatggcaagaagtttcaagtttctatt 548
Query: 481 aaacaagaaacctctagattactgggaaacttgggctgggcctacatgcaaaaaatgaac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 aaacaagaaacctctagattactgggaaacttgggctgggcctacatgcaaaaaatgaac 608
Query: 541 tatgtgatggctgag 555
|||||||||||||||
Sbjct: 609 tatgtgatggctgag 623
>gnl|LJGI|BW594414 similar to UniRef100_A7QKT8 Cluster: Chromosome undetermined
scaffold_114, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_114,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (45%)
Length = 485
Score = 194 bits (98), Expect = 4e-49
Identities = 239/286 (83%)
Strand = Plus / Plus
Query: 73 tatcatgtacttcataaggttccttatggagatactccttatgtcagagctaaacatgct 132
|||||||| |||||||||||||||||||||||| ||||||||||| ||| || || |||
Sbjct: 79 tatcatgttattcataaggttccttatggagatagtccttatgtcaaagccaagcacgct 138
Query: 133 cagctggttgagaaggacccggagggtgctattgcattattttggagggcaataaacaca 192
||| |||| ||||| ||||| || | ||||| | || ||||||| |||||| || |
Sbjct: 139 cagttggtcgagaaagacccagaagcagctatagtgttgttttggaaggcaattaatgct 198
Query: 193 ggggacaaagtggacagtgcattgaaggatatggcagtggtgatgaagcaattagacaga 252
|| |||||||| || ||||| ||||| || ||||| || ||||||||||||||||| |||
Sbjct: 199 ggagacaaagtagatagtgccttgaaagacatggctgttgtgatgaagcaattagataga 258
Query: 253 tctgaagaagccattgaagctatttgttcatttagaggactatgctccaaacaatcccaa 312
|||||||||| |||||||| || || |||||||| || ||||||||||| ||||||
Sbjct: 259 actgaagaagctattgaagccatcaaatcttttagaggcctctgctccaaacactcccaa 318
Query: 313 gagtcccttgataatgtgcttatagatctttacaagaaatgtggaa 358
||||| ||||||||||||||| | |||||||| |||||||||||||
Sbjct: 319 gagtctcttgataatgtgcttcttgatctttataagaaatgtggaa 364
>gnl|LJGI|FS335428 homologue to UniRef100_A7QDV0 Cluster: Chromosome chr4 scaffold_83,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_83, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (39%)
Length = 663
Score = 60.0 bits (30), Expect = 2e-08
Identities = 141/178 (79%)
Strand = Plus / Plus
Query: 99 tggagatactccttatgtcagagctaaacatgctcagctggttgagaaggacccggaggg 158
|||||||||||||||||| ||||| ||| ||| |||| ||||||| ||||| |||||| |
Sbjct: 230 tggagatactccttatgttagagcaaaaaatgttcagttggttgaaaaggatccggagag 289
Query: 159 tgctattgcattattttggagggcaataaacacaggggacaaagtggacagtgcattgaa 218
|| ||| || | || ||| || || || |||||| | |||||| ||||| |||||
Sbjct: 290 agcaattccactgttctgggcagccattaatgcagggggtagagtggatagtgctttgaa 349
Query: 219 ggatatggcagtggtgatgaagcaattagacagatctgaagaagccattgaagctatt 276
|||||||| | ||||||||||| | ||||||||||||||||||||||||||
Sbjct: 350 agatatggctattgtgatgaagcagcagaatcgatctgaagaagccattgaagctatt 407
>gnl|LJGI|BP040489 homologue to UniRef100_A7QDU7 Cluster: Chromosome chr4 scaffold_83,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_83, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (24%)
Length = 555
Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 251 gatctgaagaagccattgaagctatt 276
||||||||||||||||||||||||||
Sbjct: 91 gatctgaagaagccattgaagctatt 116