Miyakogusa Predicted Gene
- Lj1g3v3476140.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3476140.1 tr|G7L2D3|G7L2D3_MEDTR Pectate lyase 1-27
OS=Medicago truncatula GN=MTR_7g059290 PE=4 SV=1,84.23,0,Pectin
lyase-like,Pectin lyase fold/virulence factor; no description,Pectate
lyase/Amb allergen; Pec,CUFF.30801.1
(1305 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67208 homologue to UniRef100_Q94FT5 Cluster: Pectate ... 184 9e-46
gnl|LJGI|TC68598 homologue to UniRef100_Q94FT5 Cluster: Pectate ... 159 5e-38
gnl|LJGI|TC61678 similar to UniRef100_Q2Z1Y4 Cluster: Pectate ly... 153 3e-36
gnl|LJGI|TC65970 similar to UniRef100_Q2Z1Y4 Cluster: Pectate ly... 147 2e-34
gnl|LJGI|TC74491 similar to UniRef100_Q9M505 Cluster: Pectate ly... 111 1e-23
gnl|LJGI|TC66981 similar to UniRef100_A7NXS8 Cluster: Chromosome... 92 1e-17
gnl|LJGI|GO032618 similar to UniRef100_A7PCL8 Cluster: Chromosom... 66 6e-10
gnl|LJGI|TC62608 similar to UniRef100_Q9SCP2 Cluster: Probable p... 52 9e-06
>gnl|LJGI|TC67208 homologue to UniRef100_Q94FT5 Cluster: Pectate lyase; n=1; Fragaria x
ananassa|Rep: Pectate lyase - Fragaria ananassa
(Strawberry), partial (57%)
Length = 1331
Score = 184 bits (93), Expect = 9e-46
Identities = 387/485 (79%)
Strand = Plus / Plus
Query: 676 tggaggacaatggctgatggtgatgggatttcgatctttgggtcgagtcatatttggatt 735
|||||||||||||||||||| |||| || || || ||||| || ||||| || ||| |
Sbjct: 12 tggaggacaatggctgatggagatgccatctccatatttggctcaagtcacatctgggtc 71
Query: 736 gaccacaattcgctttctaattgtgctgatggactcgttgatgctattatggggtctact 795
|| ||||| || | || ||||||||||||| || || |||||| | ||||| || ||
Sbjct: 72 gatcacaactccttgtcccattgtgctgatggtcttgtggatgctgtcatgggctcaaca 131
Query: 796 gcgattaccatttctaacaacttcttcactcgccacaatgaggtgatactgctgggtcac 855
|| ||||| ||||| |||||| | |||| | ||||||||||||||| |||||||| |||
Sbjct: 132 gctattacaatttccaacaaccacctcacccaccacaatgaggtgatcctgctgggccac 191
Query: 856 agtgatacttatgtgcgtgataagcagatgcaagtaaccattgcattcaaccattttggg 915
||||| |||| | || ||||| |||||||| ||||| || | ||||| |||||
Sbjct: 192 agtgactcttacactagagacaagcaaatgcaagtgaccatcgcctataaccactttgga 251
Query: 916 gagggtcttattcaaagaatgccaaggtgtagacatggttatttccacgtggtaaacaat 975
||||| || || || |||||||| ||||||||||||| |||||||| ||||| ||||||
Sbjct: 252 gagggactgatccagagaatgcctcggtgtagacatggatatttccatgtggtgaacaat 311
Query: 976 gactatacccactgggaaatgtatgcgattggaggcagtgctaatccaacaattaacagc 1035
||||| || |||||||| |||||||| ||||| || |||| ||| || || || ||||||
Sbjct: 312 gactacactcactgggagatgtatgctattggtggaagtggtaaccccactatcaacagc 371
Query: 1036 caaggcaacagataccttgcccctgtgaacccttttgctaaggaggtgacaaagagagtg 1095
|| |||||| ||||| ||| ||| | ||||||||||| ||||||||||| ||||| |||
Sbjct: 372 cagggcaaccgatacaatgctcctcttaacccttttgccaaggaggtgactaagagggtg 431
Query: 1096 gatacaggggcaggtgtatggagaggttggaattggaggtcacagggagaccttctgctg 1155
|| |||| | || |||| ||||||||||||||| ||| |||||||| | ||||||
Sbjct: 432 gaaacagctcaaactgagtggaaaggttggaattggagatcagagggagacttgctgctg 491
Query: 1156 aatgg 1160
|||||
Sbjct: 492 aatgg 496
>gnl|LJGI|TC68598 homologue to UniRef100_Q94FT5 Cluster: Pectate lyase; n=1; Fragaria x
ananassa|Rep: Pectate lyase - Fragaria ananassa
(Strawberry), partial (40%)
Length = 1173
Score = 159 bits (80), Expect = 5e-38
Identities = 233/284 (82%)
Strand = Plus / Plus
Query: 877 aagcagatgcaagtaaccattgcattcaaccattttggggagggtcttattcaaagaatg 936
||||| |||||||| ||||| || | ||||| ||||| ||||| || || || ||||||
Sbjct: 20 aagcaaatgcaagtgaccatcgcctataaccactttggagagggactgatccagagaatg 79
Query: 937 ccaaggtgtagacatggttatttccacgtggtaaacaatgactatacccactgggaaatg 996
||| ||||||||||||| |||||||| ||||| ||||||||||| || |||||||| |||
Sbjct: 80 ccacggtgtagacatggatatttccatgtggtgaacaatgactacactcactgggagatg 139
Query: 997 tatgcgattggaggcagtgctaatccaacaattaacagccaaggcaacagataccttgcc 1056
||||| ||||| || |||| ||| || || || |||||||| |||||| ||||| |||
Sbjct: 140 tatgctattggtggaagtggtaaccccactatcaacagccagggcaaccgatacaatgct 199
Query: 1057 cctgtgaacccttttgctaaggaggtgacaaagagagtggatacaggggcaggtgtatgg 1116
||| | ||||||||||| ||||||||||| ||||| ||||| |||| | || |||
Sbjct: 200 cctcttaacccttttgccaaggaggtgactaagagggtggaaacagctcaaactgagtgg 259
Query: 1117 agaggttggaattggaggtcacagggagaccttctgctgaatgg 1160
| ||||||||||||||| ||| |||||||| | |||||||||||
Sbjct: 260 aaaggttggaattggagatcagagggagacttgctgctgaatgg 303
>gnl|LJGI|TC61678 similar to UniRef100_Q2Z1Y4 Cluster: Pectate lyase; n=1; Prunus
mume|Rep: Pectate lyase - Prunus mume (Japanese flowering
apricot), partial (96%)
Length = 1633
Score = 153 bits (77), Expect = 3e-36
Identities = 140/161 (86%)
Strand = Plus / Plus
Query: 883 atgcaagtaaccattgcattcaaccattttggggagggtcttattcaaagaatgccaagg 942
||||| || |||||||| || ||||| ||||| || |||||| |||||||||||||||||
Sbjct: 864 atgcaggtcaccattgcttttaaccactttggtgaaggtcttgttcaaagaatgccaagg 923
Query: 943 tgtagacatggttatttccacgtggtaaacaatgactatacccactgggaaatgtatgcg 1002
|| || ||||| ||||| || ||||| ||||||||||||||||||||||||||||||||
Sbjct: 924 tgcaggcatggatattttcatgtggtgaacaatgactatacccactgggaaatgtatgct 983
Query: 1003 attggaggcagtgctaatccaacaattaacagccaaggcaa 1043
|||||||| |||||||| || || || || |||||||||||
Sbjct: 984 attggaggaagtgctaaccccaccatcaatagccaaggcaa 1024
>gnl|LJGI|TC65970 similar to UniRef100_Q2Z1Y4 Cluster: Pectate lyase; n=1; Prunus
mume|Rep: Pectate lyase - Prunus mume (Japanese flowering
apricot), partial (92%)
Length = 1915
Score = 147 bits (74), Expect = 2e-34
Identities = 143/166 (86%)
Strand = Plus / Plus
Query: 883 atgcaagtaaccattgcattcaaccattttggggagggtcttattcaaagaatgccaagg 942
|||||||| || || || |||||||| ||||| || |||||| |||||||||||||||||
Sbjct: 861 atgcaagtcacaatcgctttcaaccactttggtgaaggtcttgttcaaagaatgccaagg 920
Query: 943 tgtagacatggttatttccacgtggtaaacaatgactatacccactgggaaatgtatgcg 1002
||||| | ||| || ||||| ||||| ||||||||||| || |||||||||||||||||
Sbjct: 921 tgtaggcttggatacttccatgtggtgaacaatgactacactcactgggaaatgtatgcc 980
Query: 1003 attggaggcagtgctaatccaacaattaacagccaaggcaacagat 1048
|||||||| |||||||| || || || |||||||||||||| ||||
Sbjct: 981 attggaggaagtgctaaccccaccatcaacagccaaggcaatagat 1026
>gnl|LJGI|TC74491 similar to UniRef100_Q9M505 Cluster: Pectate lyase; n=1; Vitis
vinifera|Rep: Pectate lyase - Vitis vinifera (Grape),
partial (62%)
Length = 899
Score = 111 bits (56), Expect = 1e-23
Identities = 119/140 (85%)
Strand = Plus / Plus
Query: 907 cattttggggagggtcttattcaaagaatgccaaggtgtagacatggttatttccacgtg 966
|||||||| || || ||| | |||||||||||||||||||||||||| || || || |||
Sbjct: 363 cattttggtgaaggccttgtccaaagaatgccaaggtgtagacatggatactttcatgtg 422
Query: 967 gtaaacaatgactatacccactgggaaatgtatgcgattggaggcagtgctaatccaaca 1026
|| ||||||||||| || ||||||||||||||||| ||||| || |||||||| || ||
Sbjct: 423 gtgaacaatgactacacacactgggaaatgtatgcaattggtgggagtgctaaccctact 482
Query: 1027 attaacagccaaggcaacag 1046
|| |||||||| || |||||
Sbjct: 483 atcaacagccaggggaacag 502
>gnl|LJGI|TC66981 similar to UniRef100_A7NXS8 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (37%)
Length = 779
Score = 91.7 bits (46), Expect = 1e-17
Identities = 121/146 (82%)
Strand = Plus / Plus
Query: 457 tggatcgtgttcaagagagacatggtgatcactctcaagcaagaactcatcatgaacagc 516
||||| ||||||||||| |||||||| ||||| || ||||| || |||||||||||||||
Sbjct: 634 tggattgtgttcaagagggacatggttatcacgctgaagcaggagctcatcatgaacagc 693
Query: 517 ttcaagaccatcgatggtcgcggtgccaatgttcacatcgcgtttggagcttgcatcacg 576
|||||||| || ||||| | || |||||||| ||||| || ||||| ||||||||
Sbjct: 694 ttcaagacaattgatggcagaggagccaatgtccacattgctaatggagggtgcatcaca 753
Query: 577 atccagtttgtcacgaatgtgatcat 602
||||||| ||| || ||||| |||||
Sbjct: 754 atccagtatgttaccaatgtcatcat 779
>gnl|LJGI|GO032618 similar to UniRef100_A7PCL8 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (42%)
Length = 714
Score = 65.9 bits (33), Expect = 6e-10
Identities = 129/161 (80%)
Strand = Plus / Plus
Query: 883 atgcaagtaaccattgcattcaaccattttggggagggtcttattcaaagaatgccaagg 942
||||| || ||| |||| |||||||||||||| || || || | || || ||||||||
Sbjct: 91 atgcaggtcaccgttgccttcaaccattttggagaagggctagtgcagaggatgccaaga 150
Query: 943 tgtagacatggttatttccacgtggtaaacaatgactatacccactgggaaatgtatgcg 1002
|| || |||| || ||||| ||||||||||||||||| || || |||| |||||||||
Sbjct: 151 tgcaggtatggatacttccatgtggtaaacaatgactacacgcaatgggcaatgtatgcc 210
Query: 1003 attggaggcagtgctaatccaacaattaacagccaaggcaa 1043
|| || || |||||| |||||| || || |||||||||||
Sbjct: 211 ataggtgggagtgcttctccaaccatcaatagccaaggcaa 251
>gnl|LJGI|TC62608 similar to UniRef100_Q9SCP2 Cluster: Probable pectate lyase 12
precursor; n=2; Arabidopsis thaliana|Rep: Probable
pectate lyase 12 precursor - Arabidopsis thaliana
(Mouse-ear cress), partial (27%)
Length = 697
Score = 52.0 bits (26), Expect = 9e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 1062 gaacccttttgctaaggaggtgacaaagag 1091
||||||||||||||||||||| ||||||||
Sbjct: 148 gaacccttttgctaaggaggttacaaagag 177