Miyakogusa Predicted Gene

Lj1g3v3458540.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v3458540.1 Non Chatacterized Hit- tr|G7KUG0|G7KUG0_MEDTR
Putative uncharacterized protein OS=Medicago truncatul,60.26,4e-18,
,CUFF.30762.1
         (332 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC70558 similar to UniRef100_A7PW92 Cluster: Chromosome...    86   2e-16

>gnl|LJGI|TC70558 similar to UniRef100_A7PW92 Cluster: Chromosome chr8 scaffold_34,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr8 scaffold_34, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (19%)
          Length = 588

 Score = 85.7 bits (43), Expect = 2e-16
 Identities = 124/151 (82%)
 Strand = Plus / Plus

                                                                       
Query: 180 ggagcttctcactcctcagaagaagcttctggactccattgacatggttgagaagcttgt 239
           |||| |||| ||||||||||||||||||||||| || ||||| | |||||||||| ||||
Sbjct: 53  ggagtttcttactcctcagaagaagcttctggagtcaattgatacggttgagaaggttgt 112

                                                                       
Query: 240 gagggaaagcctgcagaagctgaagcagtccccgagtgggagaaaggctgagagggagaa 299
           |||||||   || |||| | |||||  | | ||||  || |||| ||| |||||||||||
Sbjct: 113 gagggaagagcttcagaggttgaagaggactccgatgggtagaagggcagagagggagaa 172

                                          
Query: 300 gagagttagaactctaatgtcaatgaggtga 330
            || || | ||| ||||||||||||||||||
Sbjct: 173 aagggtgaaaacgctaatgtcaatgaggtga 203