Miyakogusa Predicted Gene
- Lj1g3v3445320.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3445320.1 tr|G7L5H7|G7L5H7_MEDTR E3 ubiquitin-protein
ligase ubr1 OS=Medicago truncatula GN=MTR_7g061540 PE=4
,74.22,0,zf-UBR,Zinc finger, N-recognin; Putative zinc finger in
N-recognin, a recogn,Zinc finger, N-recognin,CUFF.30818.1
(5958 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC73963 similar to UniRef100_A7PNM8 Cluster: Chromosome... 1879 0.0
gnl|LJGI|DC598535 similar to UniRef100_A7PNM8 Cluster: Chromosom... 1031 0.0
gnl|LJGI|AV768664 similar to UniRef100_A7PNM8 Cluster: Chromosom... 331 3e-89
>gnl|LJGI|TC73963 similar to UniRef100_A7PNM8 Cluster: Chromosome chr8 scaffold_23,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_23, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 951
Score = 1879 bits (948), Expect = 0.0
Identities = 948/948 (100%)
Strand = Plus / Plus
Query: 3163 ggtaatcaaagtctgttgtcacttcttgttttattgatggaaatgcacaggaaggataat 3222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 ggtaatcaaagtctgttgtcacttcttgttttattgatggaaatgcacaggaaggataat 63
Query: 3223 gtagacaacattgtagacgcgggtggttgtagtttatcttctctaattgaaagcatacta 3282
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 gtagacaacattgtagacgcgggtggttgtagtttatcttctctaattgaaagcatacta 123
Query: 3283 aagaaatttgcggagatcgatgatggatgcatgactgagttgcaaaaacttgctcctgaa 3342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 aagaaatttgcggagatcgatgatggatgcatgactgagttgcaaaaacttgctcctgaa 183
Query: 3343 gtggtcaatcatatttctgaatctgttccagctagaaactcaagtgcctcattgtcttct 3402
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 gtggtcaatcatatttctgaatctgttccagctagaaactcaagtgcctcattgtcttct 243
Query: 3403 tctgatagtgagaaacgcaaggccaaagctcgagagaggcaggctgcaattatggaaaag 3462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 tctgatagtgagaaacgcaaggccaaagctcgagagaggcaggctgcaattatggaaaag 303
Query: 3463 atgagatcccagcagacaaaatttttggccagcgttgatcctactgttgatgatggttct 3522
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 atgagatcccagcagacaaaatttttggccagcgttgatcctactgttgatgatggttct 363
Query: 3523 caacttgatcatgaaggtgacttagacagcgaacatgattctgaagaatctaagcaagtt 3582
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 caacttgatcatgaaggtgacttagacagcgaacatgattctgaagaatctaagcaagtt 423
Query: 3583 gtttgctctctttgccatgaccccaattctagacatcccatttcatatttgattcttcta 3642
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 gtttgctctctttgccatgaccccaattctagacatcccatttcatatttgattcttcta 483
Query: 3643 cagaaatctaggcttgtgagttctgttgacaggggtccagtatcatgggcccaactttgc 3702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 cagaaatctaggcttgtgagttctgttgacaggggtccagtatcatgggcccaactttgc 543
Query: 3703 caatcagataaaaaactcacgcctatcatcaacaccaaagagacaaatatgtctatgaac 3762
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 caatcagataaaaaactcacgcctatcatcaacaccaaagagacaaatatgtctatgaac 603
Query: 3763 atgaattcaggtggttcagaatcaacttcatcttcccacattactcggatagttcagagt 3822
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 atgaattcaggtggttcagaatcaacttcatcttcccacattactcggatagttcagagt 663
Query: 3823 gctgccagtgaattatcttctggggggcaacctggagaagttaatgcttttctgaaatat 3882
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 gctgccagtgaattatcttctggggggcaacctggagaagttaatgcttttctgaaatat 723
Query: 3883 gttaagaatcagttcccagcgttgggaaactttcagctcccagacacatcttatgatgaa 3942
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 gttaagaatcagttcccagcgttgggaaactttcagctcccagacacatcttatgatgaa 783
Query: 3943 atagaaaagacaccatatacttttgagacattagaacagggcatgtacttctccattcgt 4002
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 atagaaaagacaccatatacttttgagacattagaacagggcatgtacttctccattcgt 843
Query: 4003 gaggaaatgcatgatcttatcttgccttctaatttgatgaatggggatgaaaatgttcaa 4062
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 844 gaggaaatgcatgatcttatcttgccttctaatttgatgaatggggatgaaaatgttcaa 903
Query: 4063 actgctggagggaattcagatgctataaaaaatactggatctgtattg 4110
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 904 actgctggagggaattcagatgctataaaaaatactggatctgtattg 951
>gnl|LJGI|DC598535 similar to UniRef100_A7PNM8 Cluster: Chromosome chr8 scaffold_23,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_23, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 520
Score = 1031 bits (520), Expect = 0.0
Identities = 520/520 (100%)
Strand = Plus / Plus
Query: 2580 tttgaaaagagaactaatttataagttatccattggagatgcgactcatagccaattgtt 2639
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tttgaaaagagaactaatttataagttatccattggagatgcgactcatagccaattgtt 60
Query: 2640 gaagtctcttcctcgggatctctccaagtttgagcagcttcaaggcatcttggatacagt 2699
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaagtctcttcctcgggatctctccaagtttgagcagcttcaaggcatcttggatacagt 120
Query: 2700 tgctatttattctaatccatctggctttaatcagggtatgtattctctgcgatggccata 2759
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgctatttattctaatccatctggctttaatcagggtatgtattctctgcgatggccata 180
Query: 2760 ttggaaagagttggacttgtatcactcacgatggaattcaaaggatttacaagttgcaga 2819
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttggaaagagttggacttgtatcactcacgatggaattcaaaggatttacaagttgcaga 240
Query: 2820 agaaagatacttacgcttctgcagtgtctcagcactcactactcaactgccccggtggac 2879
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agaaagatacttacgcttctgcagtgtctcagcactcactactcaactgccccggtggac 300
Query: 2880 caaaatttatcctcctttgaaggggatagccagaatagctacttgcaaagttgtcctaca 2939
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 caaaatttatcctcctttgaaggggatagccagaatagctacttgcaaagttgtcctaca 360
Query: 2940 gattattcgtgcagttctattttatgctgttgttacttttaaatctgctgaatctcgtgc 2999
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gattattcgtgcagttctattttatgctgttgttacttttaaatctgctgaatctcgtgc 420
Query: 3000 tcctgatggtgttcttctacctgcgttacatttgctagcattatcattagatatctgttt 3059
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tcctgatggtgttcttctacctgcgttacatttgctagcattatcattagatatctgttt 480
Query: 3060 tcagcagaaagaatctagtgagaatccgtgtcatgatgtt 3099
||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tcagcagaaagaatctagtgagaatccgtgtcatgatgtt 520
>gnl|LJGI|AV768664 similar to UniRef100_A7PNM8 Cluster: Chromosome chr8 scaffold_23,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_23, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (5%)
Length = 318
Score = 331 bits (167), Expect = 3e-89
Identities = 176/179 (98%)
Strand = Plus / Plus
Query: 5780 gctgccctgaatgcaaatcacttctggatgagcctgctttgtgcctgctgtgtggtaggt 5839
||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gctgccctgaatgcatattacttctggatgagcctgctttgtgcctgctgtgtggtaggt 60
Query: 5840 tgtgctccccaagttggaaatcgtgctgcagggaaagtggatgccaaacacatgcaataa 5899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgtgctccccaagttggaaatcgtgctgcagggaaagtggatgccaaacacatgcaataa 120
Query: 5900 cctgtggagctggtactggagtgtttctgttgattaggagaacaaccgttctgcttcaa 5958
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 121 cctgtggagctggtactggagtgtttctgttgattaagagaacaaccgttctgcttcaa 179