Miyakogusa Predicted Gene
- Lj1g3v3444270.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3444270.1 Non Chatacterized Hit- tr|I1Q7B9|I1Q7B9_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=4
SV=1,24.9,3e-18,seg,NULL; bHLH-MYC_N,Transcription factor MYC/MYB
N-terminal,CUFF.30757.1
(1680 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS351450 weakly similar to UniRef100_A7PNS5 Cluster: Ch... 565 e-160
gnl|LJGI|TC59426 weakly similar to UniRef100_A7PNS5 Cluster: Chr... 234 1e-60
gnl|LJGI|TC61723 208 8e-53
>gnl|LJGI|FS351450 weakly similar to UniRef100_A7PNS5 Cluster: Chromosome chr8
scaffold_23, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr8 scaffold_23, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (31%)
Length = 757
Score = 565 bits (285), Expect = e-160
Identities = 299/306 (97%)
Strand = Plus / Minus
Query: 1333 agcagtttggttgtgaataattcagatgggaggagtgatcttatacctaggatcaagagt 1392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 agcagtttggttgtgaataattcagatgggaggagtgatcttatacctaggatcaagagt 698
Query: 1393 aaagatgaaattgctaagcatttaacatcaccatcttttgttggaaattcaagcttatta 1452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 aaagatgaaattgctaagcatttaacatcaccatcttttgttggaaattcaagcttatta 638
Query: 1453 atgattgatgagacacgtaaggaaaaggttaacagtcataggcaacctattagtgtacca 1512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 atgattgatgagacacgtaaggaaaaggttaacagtcataggcaacctattagtgtacca 578
Query: 1513 aaaaactctagtacaaccnnnnnnngagcaagagtcgataataaccgaaagccaagacca 1572
|||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 577 aaaaactctagtacaaccaaaaaaagagcaagagtcgataataaccgaaagccaagacca 518
Query: 1573 agagatagacagatgatcatggacaggatgaaggagttgagggaacttatccctgatggt 1632
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 agagatagacagatgatcatggacaggatgaaggagttgagggaacttatccctgatggt 458
Query: 1633 ggtagg 1638
||||||
Sbjct: 457 ggtagg 452
>gnl|LJGI|TC59426 weakly similar to UniRef100_A7PNS5 Cluster: Chromosome chr8
scaffold_23, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr8 scaffold_23, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (37%)
Length = 769
Score = 234 bits (118), Expect = 1e-60
Identities = 132/139 (94%)
Strand = Plus / Plus
Query: 1500 tattagtgtaccaaaaaactctagtacaaccnnnnnnngagcaagagtcgataataaccg 1559
||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1 tattagtgtaccaaaaaactctagtacaaccaaaaaaagagcaagagtcgataataaccg 60
Query: 1560 aaagccaagaccaagagatagacagatgatcatggacaggatgaaggagttgagggaact 1619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaagccaagaccaagagatagacagatgatcatggacaggatgaaggagttgagggaact 120
Query: 1620 tatccctgatggtggtagg 1638
|||||||||||||||||||
Sbjct: 121 tatccctgatggtggtagg 139
>gnl|LJGI|TC61723
Length = 731
Score = 208 bits (105), Expect = 8e-53
Identities = 105/105 (100%)
Strand = Plus / Plus
Query: 1 atggaagccacttccataaggcagcttttgaagggcttttgtgataatatgcaatggaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 atggaagccacttccataaggcagcttttgaagggcttttgtgataatatgcaatggaaa 686
Query: 61 tatggtgtcttttggaagctcaacgactgttttccattgactttg 105
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 tatggtgtcttttggaagctcaacgactgttttccattgactttg 731