Miyakogusa Predicted Gene
- Lj1g3v3444160.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3444160.2 Non Chatacterized Hit- tr|G7IKS8|G7IKS8_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,60.49,5e-17,TPR-like,NULL; no
description,Tetratricopeptide-like helical; TPR_8,Tetratricopeptide
repeat,CUFF.30752.2
(1155 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66023 weakly similar to UniRef100_A7PNQ9 Cluster: Chr... 783 0.0
gnl|LJGI|BP085796 similar to UniRef100_A7PNQ9 Cluster: Chromosom... 194 9e-49
gnl|LJGI|BP066097 133 3e-30
>gnl|LJGI|TC66023 weakly similar to UniRef100_A7PNQ9 Cluster: Chromosome chr8
scaffold_23, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr8 scaffold_23, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (23%)
Length = 859
Score = 783 bits (395), Expect = 0.0
Identities = 509/547 (93%)
Strand = Plus / Plus
Query: 1 atggcagtccctgatgctgttcgtatgatcaactacgcaatgaaacaagctaggactgac 60
|||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 310 atggcagtccctgatgctgttcgtatgatcaactacgcaatggaaaaagctaggactgac 369
Query: 61 aaatcagttgggtcgtacggtctaggtatgctggtgttgaagcattgcgttacaactgag 120
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 aaatcagttggatcgtacggtctaggtatgctggtgttgaagcattgcgttacaactgag 429
Query: 121 ttaactgagggcgaagacccacaacatgagaattcgaaaggaattgctttgcttgcttgg 180
||||| |||||| | |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 430 ttaaccgagggcaaggacccacaacatgagaattccaaaggaattgctttgcttgcttgg 489
Query: 181 tccactttgttgtctgaaagaggagagtatggtgatgcaatagagaagctccagagtgtt 240
||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||
Sbjct: 490 tccactttgttgtctgaaagaggagagtacggtgatgcaattgagaagctgcagagtgtt 549
Query: 241 caagaattgaccaattctttgttgggggttagagttgctgcctttgaagccgaggctggg 300
|||||||||||||||||||| ||||| |||||||||||||||||||||||| |||||||
Sbjct: 550 caagaattgaccaattctttcttgggtgttagagttgctgcctttgaagcccaggctgga 609
Query: 301 cttcatctcgagttggggcaggatgatatggcatcagcagtgggggacaaatgcatagag 360
||||||||||||||||||||||||||||||||||||| ||||||||| || ||| | |||
Sbjct: 610 cttcatctcgagttggggcaggatgatatggcatcagtagtgggggataagtgcgtggag 669
Query: 361 ctcctagagaaacagaatgctgaagactctgaggctctaaaggttcgtgctaaagcactg 420
||| | || |||||||| | ||||| |||||||||||||| |||||||||||||||||
Sbjct: 670 ctcatggaaaaacagaaaacggaagattctgaggctctaaatgttcgtgctaaagcacta 729
Query: 421 aaagggcttattgaacttgtcaagggcaatattgagtcagctgaagccttctttgacaaa 480
|||||||| |||||||||| |||||| |||||||||||||| ||||| ||||||||||||
Sbjct: 730 aaagggctgattgaacttgccaagggaaatattgagtcagcggaagctttctttgacaaa 789
Query: 481 tctctgctcagcaccctatgtgatggctctgctgctctatcatatggggaattccttcaa 540
||||||| ||||| |||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 790 tctctgcgcagcaagctatgtgacggttctgctgctctatcatatggggaattccttcaa 849
Query: 541 acaaagc 547
|||||||
Sbjct: 850 acaaagc 856
>gnl|LJGI|BP085796 similar to UniRef100_A7PNQ9 Cluster: Chromosome chr8 scaffold_23,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_23, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 459
Score = 194 bits (98), Expect = 9e-49
Identities = 140/154 (90%)
Strand = Plus / Minus
Query: 1002 catccaagaaaatagaaaggatgaaggagagaagatgaagaactttgctgaggctatatg 1061
||||| |||||||||||||||||||||||| ||| |||||||||| ||||||||||||||
Sbjct: 454 catcccagaaaatagaaaggatgaaggagaaaagttgaagaacttggctgaggctatatg 395
Query: 1062 gagaaaccacaggatgtctctagatgatgctctgggaaatacagaatcaaataaagtttg 1121
|||||||| ||||||||||| ||||| ||||| ||| |||||||||| ||||||||||
Sbjct: 394 gagaaaccgtaggatgtctctggatgaagctctaggagatacagaatccaataaagtttc 335
Query: 1122 ggtgatagatgctcgtattagtaggctcctgtaa 1155
||| || |||||||||||||||||||||||||||
Sbjct: 334 ggttattgatgctcgtattagtaggctcctgtaa 301
>gnl|LJGI|BP066097
Length = 392
Score = 133 bits (67), Expect = 3e-30
Identities = 95/103 (92%), Gaps = 1/103 (0%)
Strand = Plus / Minus
Query: 1054 gctatatggagaaaccacaggatgtctctagatgatgctctgggaaatacagaatcaaat 1113
|||||||||||||||| | ||||||||||||||||||||||||||||||||||||| |||
Sbjct: 392 gctatatggagaaacccccggatgtctctagatgatgctctgggaaatacagaatccaat 333
Query: 1114 aaagtttgggtgat-agatgctcgtattagtaggctcctgtaa 1155
|||| |||| |||| ||||||||| ||||||||||||| ||||
Sbjct: 332 aaagcttggctgatcagatgctcgcattagtaggctccggtaa 290