Miyakogusa Predicted Gene

Lj1g3v3444120.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v3444120.1 CUFF.30745.1
         (330 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC58660 weakly similar to UniRef100_Q9FQZ2 Cluster: Avr...   119   1e-26

>gnl|LJGI|TC58660 weakly similar to UniRef100_Q9FQZ2 Cluster: Avr9/Cf-9 rapidly
           elicited protein 137; n=1; Nicotiana tabacum|Rep:
           Avr9/Cf-9 rapidly elicited protein 137 - Nicotiana
           tabacum (Common tobacco), partial (31%)
          Length = 839

 Score =  119 bits (60), Expect = 1e-26
 Identities = 162/196 (82%)
 Strand = Plus / Minus

                                                                       
Query: 25  accaatatatacaactcaaccctaccagcacctccacaatggcctcctccaccttctcca 84
           |||||||||||||||||||||| |||| |||||||||||| ||| ||||| |||||||||
Sbjct: 763 accaatatatacaactcaaccccaccaacacctccacaatcgccgcctccgccttctcca 704

                                                                       
Query: 85  actccgagtaatgcaacgtttgtaacaagagcacggtgggcttcgtctcaaacttctgct 144
           | ||||||||||||| ||| || | |   ||||| || ||| ||||||| |||| |  | 
Sbjct: 703 agtccgagtaatgcagcgtctgcatccgcagcaccgtcggcctcgtctcgaactgcgccg 644

                                                                       
Query: 145 tctccatgttcctttcaccctgccacttcactgtgtcatgcgccaccggcaacagccatt 204
           ||||||  | ||| ||| ||||||||| ||| ||||| ||||| |||||| ||||||| |
Sbjct: 643 tctccaaatgcctctcagcctgccactgcacggtgtcctgcgcaaccggcgacagccact 584

                           
Query: 205 ccatcacctcccccac 220
           |||||| |||| ||||
Sbjct: 583 ccatcagctcctccac 568