Miyakogusa Predicted Gene
- Lj1g3v3443930.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3443930.1 NODE_41177_length_341_cov_626.360718.path2.1
(171 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75486 similar to UniRef100_Q10NC7 Cluster: Oxysterol-... 339 3e-93
gnl|LJGI|FS337869 similar to UniRef100_Q9LTI7 Cluster: Oxysterol... 50 4e-06
gnl|LJGI|TC59771 similar to UniRef100_Q9LTI7 Cluster: Oxysterol-... 50 4e-06
>gnl|LJGI|TC75486 similar to UniRef100_Q10NC7 Cluster: Oxysterol-binding protein,
expressed; n=2; Oryza sativa|Rep: Oxysterol-binding
protein, expressed - Oryza sativa subsp. japonica
(Rice), partial (94%)
Length = 1624
Score = 339 bits (171), Expect = 3e-93
Identities = 171/171 (100%)
Strand = Plus / Plus
Query: 1 atgatgcagaagtatattggatctgatatcacatccatggtaacacttccagttatcatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 atgatgcagaagtatattggatctgatatcacatccatggtaacacttccagttatcatc 365
Query: 61 tttgagccaatgacaatgttacagaaaatggctgagcttatggagtattcttacctgtta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 tttgagccaatgacaatgttacagaaaatggctgagcttatggagtattcttacctgtta 425
Query: 121 gatatggcagataagactgacgatccatacatgagacttgtatatgcttca 171
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 gatatggcagataagactgacgatccatacatgagacttgtatatgcttca 476
>gnl|LJGI|FS337869 similar to UniRef100_Q9LTI7 Cluster: Oxysterol-binding protein;
n=1; Arabidopsis thaliana|Rep: Oxysterol-binding protein
- Arabidopsis thaliana (Mouse-ear cress), partial (43%)
Length = 766
Score = 50.1 bits (25), Expect = 4e-06
Identities = 118/149 (79%)
Strand = Plus / Plus
Query: 1 atgatgcagaagtatattggatctgatatcacatccatggtaacacttccagttatcatc 60
||||||||||| |||||||| || || | ||||| ||||| ||| | || || || ||
Sbjct: 362 atgatgcagaaatatattggctccgacgtgacatcgatggtgacattgcccgtcattata 421
Query: 61 tttgagccaatgacaatgttacagaaaatggctgagcttatggagtattcttacctgtta 120
|| || || ||||| ||| | ||||||||||||||| | |||||||| || ||| |||||
Sbjct: 422 ttcgaaccgatgactatgcttcagaaaatggctgagttgatggagtactcatacttgtta 481
Query: 121 gatatggcagataagactgacgatccata 149
||| ||||||| | || || ||||||||
Sbjct: 482 gatcgggcagatgaaacagaggatccata 510
>gnl|LJGI|TC59771 similar to UniRef100_Q9LTI7 Cluster: Oxysterol-binding protein;
n=1; Arabidopsis thaliana|Rep: Oxysterol-binding protein
- Arabidopsis thaliana (Mouse-ear cress), partial (97%)
Length = 1695
Score = 50.1 bits (25), Expect = 4e-06
Identities = 118/149 (79%)
Strand = Plus / Plus
Query: 1 atgatgcagaagtatattggatctgatatcacatccatggtaacacttccagttatcatc 60
||||||||||| |||||||| || || | ||||| ||||| ||| | || || || ||
Sbjct: 272 atgatgcagaaatatattggctccgacgtgacatcgatggtgacattgcccgtcattata 331
Query: 61 tttgagccaatgacaatgttacagaaaatggctgagcttatggagtattcttacctgtta 120
|| || || ||||| ||| | ||||||||||||||| | |||||||| || ||| |||||
Sbjct: 332 ttcgaaccgatgactatgcttcagaaaatggctgagttgatggagtactcatacttgtta 391
Query: 121 gatatggcagataagactgacgatccata 149
||| ||||||| | || || ||||||||
Sbjct: 392 gatcgggcagatgaaacagaggatccata 420