Miyakogusa Predicted Gene

Lj1g3v3443780.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v3443780.1 BP071979.path1.1
         (136 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP071979                                                     260   2e-69
gnl|LJGI|TC69244                                                      194   9e-50
gnl|LJGI|AV773387 similar to UniRef100_A9KJM8 Cluster: Heptapren...   165   8e-41

>gnl|LJGI|BP071979 
          Length = 386

 Score =  260 bits (131), Expect = 2e-69
 Identities = 131/131 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgcttctgaaacagtttattttagtgaatattgtatgttgtttccttatgttgtgtgta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 atgcttctgaaacagtttattttagtgaatattgtatgttgtttccttatgttgtgtgta 326

                                                                       
Query: 61  ttcacgggatcctgtaaaactgaggaccatgtgtttgatatcgactcttgcattttgcaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttcacgggatcctgtaaaactgaggaccatgtgtttgatatcgactcttgcattttgcaa 266

                      
Query: 121 aactggcggct 131
           |||||||||||
Sbjct: 265 aactggcggct 255


>gnl|LJGI|TC69244 
          Length = 988

 Score =  194 bits (98), Expect = 9e-50
 Identities = 114/118 (96%), Gaps = 1/118 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcttctgaaacagtttattttagtgaatattgtatgttgtttccttatgttgtgtgta 60
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 871 atgcttctgaaac-gtttattttagtgaatattgtatgttgtttccttatgttgtgtgta 929

                                                                     
Query: 61  ttcacgggatcctgtaaaactgaggaccatgtgtttgatatcgactcttgcattttgc 118
           |||||||||||| ||||||||||||||| |||||||||||||||||||||| ||||||
Sbjct: 930 ttcacgggatcccgtaaaactgaggaccctgtgtttgatatcgactcttgccttttgc 987


>gnl|LJGI|AV773387 similar to UniRef100_A9KJM8 Cluster: Heptaprenyl diphosphate
           synthase component I; n=1; Clostridium phytofermentans
           ISDg|Rep: Heptaprenyl diphosphate synthase component I -
           Clostridium phytofermentans ISDg, partial (8%)
          Length = 494

 Score =  165 bits (83), Expect = 8e-41
 Identities = 108/115 (93%), Gaps = 1/115 (0%)
 Strand = Plus / Minus

                                                                       
Query: 3   gcttctgaaacagtttattttagtgaatattgtatgttgtttccttatgttgtgtgtatt 62
           ||||||||||| || ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 123 gcttctgaaaccgtctattttagtgaatattgtatgttgtttccttatcttgtgtgtatt 64

                                                                  
Query: 63  cacgggatcctgtaaaactgagga-ccatgtgtttgatatcgactcttgcatttt 116
           |||||||||||||| ||||||||| |||||| |||||||||||||||||| ||||
Sbjct: 63  cacgggatcctgtacaactgaggacccatgtctttgatatcgactcttgcctttt 9