Miyakogusa Predicted Gene

Lj1g3v3443700.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v3443700.1 Non Chatacterized Hit- tr|K4BML8|K4BML8_SOLLC
Uncharacterized protein OS=Solanum lycopersicum GN=Sol,51.69,2e-19,no
description,Dynein light chain, type 1/2; Dynein_light,Dynein light
chain, type 1/2; SUBFAMILY NO,CUFF.30718.1
         (342 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO022053 weakly similar to UniRef100_A7PNV1 Cluster: Ch...   587   e-167
gnl|LJGI|BP085371 similar to UniRef100_A2Q4T9 Cluster: Protein k...    86   2e-16

>gnl|LJGI|GO022053 weakly similar to UniRef100_A7PNV1 Cluster: Chromosome chr8
           scaffold_23, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr8 scaffold_23, whole genome
           shotgun sequence - Vitis vinifera (Grape), complete
          Length = 376

 Score =  587 bits (296), Expect = e-167
 Identities = 302/304 (99%)
 Strand = Plus / Plus

                                                                       
Query: 39  gccagaggagatgcagaaccatgttatggagtttgctcaccaagctctcgatgcacatga 98
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gccagaggagatgcaaaaccatgttatggagtttgctcaccaagctctcgatgcacatga 60

                                                                       
Query: 99  agtttctgattgtcagtctatttctcatttcatcaaacagaaacttgatgaagcatatgg 158
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 61  agtttctgattgtcagtctacttctcatttcatcaaacagaaacttgatgaagcatatgg 120

                                                                       
Query: 159 accagcatggaattccgtggttggcaaagactttggatcttgcattacatatttatctgg 218
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 accagcatggaattccgtggttggcaaagactttggatcttgcattacatatttatctgg 180

                                                                       
Query: 219 aagtttcatattctttcatgttgagatgatggaatttctgatattcaaagatgggaagga 278
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aagtttcatattctttcatgttgagatgatggaatttctgatattcaaagatgggaagga 240

                                                                       
Query: 279 cttcggagaaagaagggtagaagctattggagtgcagcagaaagctacaaacagagattc 338
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cttcggagaaagaagggtagaagctattggagtgcagcagaaagctacaaacagagattc 300

               
Query: 339 ataa 342
           ||||
Sbjct: 301 ataa 304


>gnl|LJGI|BP085371 similar to UniRef100_A2Q4T9 Cluster: Protein kinase; n=1; Medicago
           truncatula|Rep: Protein kinase - Medicago truncatula
           (Barrel medic), partial (4%)
          Length = 419

 Score = 85.7 bits (43), Expect = 2e-16
 Identities = 67/75 (89%)
 Strand = Plus / Minus

                                                                       
Query: 265 aaagatgggaaggacttcggagaaagaagggtagaagctattggagtgcagcagaaagct 324
           ||||||||||| || ||  ||||||| ||| |||||||||||||||||| ||||||||||
Sbjct: 122 aaagatgggaaagaatttagagaaagcaggatagaagctattggagtgctgcagaaagct 63

                          
Query: 325 acaaacagagattca 339
           ||||| |||||||||
Sbjct: 62  acaaatagagattca 48