Miyakogusa Predicted Gene
- Lj1g3v3442650.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3442650.1 tr|F6LPV4|F6LPV4_MEDTR RopGEF7b OS=Medicago
truncatula PE=2 SV=1,71.27,0,PRONE,Plant specific Rop nucleotide
exchanger, PRONE; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NUL,CUFF.30715.1
(1635 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO012525 similar to UniRef100_A7PNW1 Cluster: Chromosom... 1217 0.0
gnl|LJGI|TC79297 similar to UniRef100_A7PIJ5 Cluster: Chromosome... 80 5e-14
gnl|LJGI|FS327751 weakly similar to UniRef100_A7PIJ5 Cluster: Ch... 68 2e-10
>gnl|LJGI|GO012525 similar to UniRef100_A7PNW1 Cluster: Chromosome chr8 scaffold_23,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_23, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (27%)
Length = 620
Score = 1217 bits (614), Expect = 0.0
Identities = 617/618 (99%)
Strand = Plus / Plus
Query: 1014 gattgcaaacagagtagaggcttccatttacatttggcataaaaagactaactcaaagcc 1073
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 gattgcaaacagagtagaggcttccatttacatttggcataaaaagactaactcaaagcc 62
Query: 1074 tgcaagtcgcgccacaagatcaagttcaagatcatcgtgggaaatgttcagggatctgat 1133
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 tgcaagtcgcgccgcaagatcaagttcaagatcatcgtgggaaatgttcagggatctgat 122
Query: 1134 tgttgagggagagaaaagtgaaatgcttgtagagagagcagaaagccttcttctgtcctt 1193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 tgttgagggagagaaaagtgaaatgcttgtagagagagcagaaagccttcttctgtcctt 182
Query: 1194 gatgcagcgattcccgggtctgcctcaaaccgccttggacatgagcaaaatccaatgcaa 1253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 gatgcagcgattcccgggtctgcctcaaaccgccttggacatgagcaaaatccaatgcaa 242
Query: 1254 caaggatgtagggaaatccattctagagagttactcaagagtactggagagtttggcttc 1313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 caaggatgtagggaaatccattctagagagttactcaagagtactggagagtttggcttc 302
Query: 1314 taatattgttgcgcgcattgatgatgtgctctatgtagatgatttaaccaagcattctga 1373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 taatattgttgcgcgcattgatgatgtgctctatgtagatgatttaaccaagcattctga 362
Query: 1374 tcaattctcatctctaccaaaagttgctgtaattactcaaaagagcatttcatcagctcc 1433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 tcaattctcatctctaccaaaagttgctgtaattactcaaaagagcatttcatcagctcc 422
Query: 1434 atactcaatgcctgtccaaagcacttcgtataaaccagctttcgggacaccatgtttttc 1493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 atactcaatgcctgtccaaagcacttcgtataaaccagctttcgggacaccatgtttttc 482
Query: 1494 tcctgcaaagggtaaaagatcaccaattaattttcacagcactgatgaagaggcagcatt 1553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 tcctgcaaagggtaaaagatcaccaattaattttcacagcactgatgaagaggcagcatt 542
Query: 1554 tgaaatagacatagagtccagtgactgcacagatgttaaactcaatgttctggaccgggc 1613
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 tgaaatagacatagagtccagtgactgcacagatgttaaactcaatgttctggaccgggc 602
Query: 1614 atggctagaatctcaaag 1631
||||||||||||||||||
Sbjct: 603 atggctagaatctcaaag 620
>gnl|LJGI|TC79297 similar to UniRef100_A7PIJ5 Cluster: Chromosome chr13 scaffold_17,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_17, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (26%)
Length = 1034
Score = 79.8 bits (40), Expect = 5e-14
Identities = 133/164 (81%)
Strand = Plus / Plus
Query: 1192 ttgatgcagcgattcccgggtctgcctcaaaccgccttggacatgagcaaaatccaatgc 1251
|||| ||||||||||||||| | ||||||| ||||||| | ||||||||||| |||
Sbjct: 251 ttgaagcagcgattcccgggattaactcaaactaccttggataccagcaaaatccagtgc 310
Query: 1252 aacaaggatgtagggaaatccattctagagagttactcaagagtactggagagtttggct 1311
||||||||||| || ||| |||| |||||| | || |||||||| |||||||| ||||
Sbjct: 311 aacaaggatgttggaaaagccatcctagagggctattcaagagttctggagagcatggca 370
Query: 1312 tctaatattgttgcgcgcattgatgatgtgctctatgtagatga 1355
| ||| ||||| || || || |||||| |||| ||||| |||||
Sbjct: 371 tttaacattgtagctcgtatagatgatttgctatatgtggatga 414
>gnl|LJGI|FS327751 weakly similar to UniRef100_A7PIJ5 Cluster: Chromosome chr13
scaffold_17, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr13 scaffold_17, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (12%)
Length = 646
Score = 67.9 bits (34), Expect = 2e-10
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 271 atgatgaaggagaggtttgcaaaattgctacttggagaagacatgtcagg 320
||||||||||| ||||||||||||||||| ||||| ||||| ||||||||
Sbjct: 562 atgatgaaggaaaggtttgcaaaattgctgcttggtgaagatatgtcagg 611