Miyakogusa Predicted Gene
- Lj1g3v3441330.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3441330.1 CUFF.30713.1
(318 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC593222 homologue to UniRef100_A8CG43 Cluster: NADH-ub... 589 e-168
gnl|LJGI|FS329350 weakly similar to UniRef100_A7P402 Cluster: Ch... 377 e-104
gnl|LJGI|BP049772 weakly similar to UniRef100_A7P402 Cluster: Ch... 369 e-102
gnl|LJGI|TC60856 weakly similar to UniRef100_A7P629 Cluster: Chr... 307 2e-83
gnl|LJGI|BW612099 similar to UniRef100_A7P402 Cluster: Chromosom... 268 2e-71
gnl|LJGI|BW596026 226 6e-59
gnl|LJGI|DC599657 homologue to UniRef100_A6YIK1 Cluster: NADH-ub... 184 2e-46
gnl|LJGI|TC68847 UniRef100_A9TQA4 Cluster: Predicted protein; n=... 174 2e-43
gnl|LJGI|TC69937 similar to UniRef100_Q3HY29 Cluster: Cyclooxyge... 147 5e-35
gnl|LJGI|FS326353 72 2e-12
>gnl|LJGI|DC593222 homologue to UniRef100_A8CG43 Cluster: NADH-ubiquinone
oxidoreductase chain 4; n=1; Culicoides arakawae|Rep:
NADH-ubiquinone oxidoreductase chain 4 - Culicoides
arakawae, partial (4%)
Length = 588
Score = 589 bits (297), Expect = e-168
Identities = 311/318 (97%)
Strand = Plus / Plus
Query: 1 atgttgaggccagggattcctctccccattacatcgcaaggccctctctttaacccccaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 atgttgaggccagggattcctctccccattacatcgcaaggccctctctttaacccccaa 129
Query: 61 agttgtggctgtcgnnnnnnnccgcagcggcatcggcatcggcgacgaggtgaagaccct 120
|||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 130 agttgtggctgtcgtttttttccgcagcggcatcggcatcggcgacgaggtgaagaccct 189
Query: 121 gaggggcgggctccggcggcgtgcgaggtaggggagataggtggatggcgaactgaggaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 gaggggcgggctccggcggcgtgcgaggtaggggagataggtggatggcgaactgaggaa 249
Query: 181 tctgtcccgtccattaggaactgcggaatcgactgcgagattcgcacagcaggtcataaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 tctgtcccgtccattaggaactgcggaatcgactgcgagattcgcacagcaggtcataaa 309
Query: 241 aatcttcttctcctctattttatccctatttgtgtatctgctcttcttactctgctctgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 aatcttcttctcctctattttatccctatttgtgtatctgctcttcttactctgctctgg 369
Query: 301 gttgaagccttggtttaa 318
||||||||||||||||||
Sbjct: 370 gttgaagccttggtttaa 387
>gnl|LJGI|FS329350 weakly similar to UniRef100_A7P402 Cluster: Chromosome chr1
scaffold_5, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr1 scaffold_5, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (6%)
Length = 651
Score = 377 bits (190), Expect = e-104
Identities = 281/316 (88%), Gaps = 17/316 (5%)
Strand = Plus / Plus
Query: 1 atgttgaggccagggattcctctccccattacatcgcaaggccctctctttaacccccaa 60
|||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 83 atgttgaggccaaggattcctctccccattacatcgcaaggccctctcttaaacccccaa 142
Query: 61 agttgtggctgtcgnnnnnnnccgcagcggcatcggcatcggc------------gacga 108
||||||||||| || |||||||||||||||||||||| |||||
Sbjct: 143 agttgtggctgacgtttttttccgcagcggcatcggcatcggcatcggcatcggcgacga 202
Query: 109 ggtgaagaccctgaggggcgggctccggcggcgtgcgaggtaggggagataggtggatgg 168
||||||||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 203 ggtgaagaccctgaggg-----ctccggcgacgtgcgaggtaggggagataggtggatgg 257
Query: 169 cgaactgaggaatctgtcccgtccattaggaactgcggaatcgactgcgagattcgcaca 228
|||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 258 cgaactgaggaatcggtcccgtccattaggaactgaggaatcgactgcgagattcgcaca 317
Query: 229 gcaggtcataaaaatcttcttctcctctattttatccctatttgtgtatctgctcttctt 288
|||||| |||||||||||||||||||| |||||||||||||||||| ||| |||||||||
Sbjct: 318 gcaggtgataaaaatcttcttctcctccattttatccctatttgtgaatccgctcttctt 377
Query: 289 actctgctctgggttg 304
||| ||||||||||||
Sbjct: 378 actatgctctgggttg 393
>gnl|LJGI|BP049772 weakly similar to UniRef100_A7P402 Cluster: Chromosome chr1
scaffold_5, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr1 scaffold_5, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (7%)
Length = 530
Score = 369 bits (186), Expect = e-102
Identities = 280/316 (88%), Gaps = 17/316 (5%)
Strand = Plus / Plus
Query: 1 atgttgaggccagggattcctctccccattacatcgcaaggccctctctttaacccccaa 60
|||||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 87 atgttgaggccaaggattcctctccccattacatcgcaaggccctctcttaaaccaccaa 146
Query: 61 agttgtggctgtcgnnnnnnnccgcagcggcatcggcatcggc------------gacga 108
||||||||||| || |||||||||||||||||||||| |||||
Sbjct: 147 agttgtggctgacgtttttttccgcagcggcatcggcatcggcatcggcatcggcgacga 206
Query: 109 ggtgaagaccctgaggggcgggctccggcggcgtgcgaggtaggggagataggtggatgg 168
||||||||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 207 ggtgaagaccctgaggg-----ctccggcgacgtgcgaggtaggggagataggtggatgg 261
Query: 169 cgaactgaggaatctgtcccgtccattaggaactgcggaatcgactgcgagattcgcaca 228
|||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 262 cgaactgaggaatcggtcccgtccattaggaactgaggaatcgactgcgagattcgcaca 321
Query: 229 gcaggtcataaaaatcttcttctcctctattttatccctatttgtgtatctgctcttctt 288
|||||| |||||||||||||||||||| |||||||||||||||||| ||| |||||||||
Sbjct: 322 gcaggtgataaaaatcttcttctcctccattttatccctatttgtgaatccgctcttctt 381
Query: 289 actctgctctgggttg 304
||| ||||||||||||
Sbjct: 382 actatgctctgggttg 397
>gnl|LJGI|TC60856 weakly similar to UniRef100_A7P629 Cluster: Chromosome chr4
scaffold_6, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr4 scaffold_6, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (14%)
Length = 1537
Score = 307 bits (155), Expect = 2e-83
Identities = 208/228 (91%), Gaps = 5/228 (2%)
Strand = Plus / Plus
Query: 1 atgttgaggccagggattcctctccccattacatcgcaaggccctctctttaacccccaa 60
||||||||||||||||||||||||||| |||||||||||||||||||| | |||||||||
Sbjct: 51 atgttgaggccagggattcctctccccgttacatcgcaaggccctctcctaaacccccaa 110
Query: 61 agttgtggctgtcgnnnnnnnccgcagcggcatcggcatcggcgacgaggtgaagaccct 120
|||||||||||||| |||||||||||||| |||||||||||||||| |||||||
Sbjct: 111 agttgtggctgtcgtttttttccgcagcggcatcgacatcggcgacgaggtggagaccct 170
Query: 121 gaggggcgggctccggcggcgtgcgaggtaggggagataggtggatggcgaactgaggaa 180
||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 171 gaggg-----ctccggcggcgtgcgaggtaggggagataggcggatggcgaactgaggaa 225
Query: 181 tctgtcccgtccattaggaactgcggaatcgactgcgagattcgcaca 228
||||||||||||||||||||||| |||||||||||||||||| |||||
Sbjct: 226 tctgtcccgtccattaggaactgaggaatcgactgcgagatttgcaca 273
>gnl|LJGI|BW612099 similar to UniRef100_A7P402 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 473
Score = 268 bits (135), Expect = 2e-71
Identities = 214/245 (87%), Gaps = 17/245 (6%)
Strand = Plus / Plus
Query: 1 atgttgaggccagggattcctctccccattacatcgcaaggccctctctttaacccccaa 60
|||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 57 atgttgaggccaaggattcctctccccattacatcgcaaggccctctcttaaacccccaa 116
Query: 61 agttgtggctgtcgnnnnnnnccgcagcggcatcggcatcggc------------gacga 108
||||||||||| || |||||||||||||||||||||| |||||
Sbjct: 117 agttgtggctgacgtttttttccgcagcggcatcggcatcggcatcggcatcggcgacga 176
Query: 109 ggtgaagaccctgaggggcgggctccggcggcgtgcgaggtaggggagataggtggatgg 168
||||||||||||||||| |||||||| ||||||| |||||||||||||||||||||
Sbjct: 177 ggtgaagaccctgaggg-----ctccggcgacgtgcgaagtaggggagataggtggatgg 231
Query: 169 cgaactgaggaatctgtcccgtccattaggaactgcggaatcgactgcgagattcgcaca 228
|||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 232 cgaactgaggaatcggtcccgtccattaggaactgaggaatcgactgcgagattcgcaca 291
Query: 229 gcagg 233
|||||
Sbjct: 292 gcagg 296
>gnl|LJGI|BW596026
Length = 457
Score = 226 bits (114), Expect = 6e-59
Identities = 211/245 (86%), Gaps = 19/245 (7%)
Strand = Plus / Plus
Query: 1 atgttgaggccagggattcctctccccattacatcgcaaggccctctctttaacccccaa 60
||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||
Sbjct: 67 atgttgaggccagagattcctctccccattaaatcgcaaggccctctctttaacccc-aa 125
Query: 61 agttgtggctgtcgnnnnnnnccgcagcggcatcggcatcggc------------gacga 108
|||||||||||||| |||||||||||||||||||||| |||||
Sbjct: 126 agttgtggctgtcgtttttc-ccgcagcggcatcggcatcggcatcggcatcggcgacga 184
Query: 109 ggtgaagaccctgaggggcgggctccggcggcgtgcgaggtaggggagataggtggatgg 168
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 185 ggtgaagaccctgaggg-----ctccggcggcgtgcgaggtaggggagataggtggatgg 239
Query: 169 cgaactgaggaatctgtcccgtccattaggaactgcggaatcgactgcgagattcgcaca 228
|||||||| |||| ||| |||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 240 cgaactgaagaatttgttccgtccattaataactgaggaatcgactgcgagattcgcaca 299
Query: 229 gcagg 233
||||
Sbjct: 300 acagg 304
>gnl|LJGI|DC599657 homologue to UniRef100_A6YIK1 Cluster: NADH-ubiquinone
oxidoreductase chain 4; n=1; Litopenaeus vannamei|Rep:
NADH-ubiquinone oxidoreductase chain 4 - Penaeus
vannamei (Penoeid shrimp) (European white shrimp),
partial (4%)
Length = 580
Score = 184 bits (93), Expect = 2e-46
Identities = 173/203 (85%), Gaps = 18/203 (8%)
Strand = Plus / Plus
Query: 1 atgttgaggccagggattcctctccccattacatcgcaaggccctctctttaacccccaa 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 95 atgttgaggccagagattcctctccccattacatcgcaaggccctctctttaacccc-ag 153
Query: 61 agttgtggctgtcgnnnnnnnccgcagcggcatcggcatcggcgacgaggtgaagaccct 120
||||||| |||||| |||||||||| |||||||||||||||||
Sbjct: 154 agttgtgcctgtcgtttttttccgcagcggc------------gacgaggtgaagaccct 201
Query: 121 gaggggcgggctccggcggcgtgcgaggtaggggagataggtggatggcgaactgaggaa 180
||||| |||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 202 gaggg-----ctccggcggcgtgcgaggtaggggagataggtagatggcgaactgaggaa 256
Query: 181 tctgtcccgtccattaggaactg 203
||||| |||||||||||||||||
Sbjct: 257 tctgttccgtccattaggaactg 279
>gnl|LJGI|TC68847 UniRef100_A9TQA4 Cluster: Predicted protein; n=1; Physcomitrella
patens subsp. patens|Rep: Predicted protein -
Physcomitrella patens subsp. patens, partial (12%)
Length = 773
Score = 174 bits (88), Expect = 2e-43
Identities = 173/203 (85%), Gaps = 19/203 (9%)
Strand = Plus / Plus
Query: 1 atgttgaggccagggattcctctccccattacatcgcaaggccctctctttaacccccaa 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 163 atgttgaggccagagattcctctccccattacatcgcaaggccctctctttaacccc-ag 221
Query: 61 agttgtggctgtcgnnnnnnnccgcagcggcatcggcatcggcgacgaggtgaagaccct 120
||||||| |||||| |||||||||| |||||||||||||||||
Sbjct: 222 agttgtgcctgtcgtttttt-ccgcagcggc------------gacgaggtgaagaccct 268
Query: 121 gaggggcgggctccggcggcgtgcgaggtaggggagataggtggatggcgaactgaggaa 180
||||| |||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 269 gaggg-----ctccggcggcgtgcgaggtaggggagataggtagatggcgaactgaggaa 323
Query: 181 tctgtcccgtccattaggaactg 203
||||| |||||||||||||||||
Sbjct: 324 tctgttccgtccattaggaactg 346
>gnl|LJGI|TC69937 similar to UniRef100_Q3HY29 Cluster: Cyclooxygenase 1b2; n=1; Homo
sapiens|Rep: Cyclooxygenase 1b2 - Homo sapiens (Human),
partial (3%)
Length = 1257
Score = 147 bits (74), Expect = 5e-35
Identities = 142/164 (86%), Gaps = 7/164 (4%)
Strand = Plus / Plus
Query: 1 atgttgaggccagggattcctctccccattacatcgcaaggccctctctttaacccccaa 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 108 atgttgaggccagggattcctctccccattacatcacaaggccctctctttaa-ccccaa 166
Query: 61 agttgtggctgtcgnnnnnnnccgcagcggcatcggcatcggcgacgaggtgaagaccct 120
|||||| ||||||| ||||||||||||| |||||||| ||||||| ||||||||
Sbjct: 167 agttgtcgctgtcg-ttttttccgcagcggcatctgcatcggcaacgaggtaaagaccct 225
Query: 121 gaggggcgggctccggcggcgtgcgaggtaggggagataggtgg 164
| |||||||| |||||| |||||||||||||||| ||||
Sbjct: 226 ta-----gggctccgacggcgtacgaggtaggggagataagtgg 264
>gnl|LJGI|FS326353
Length = 443
Score = 71.9 bits (36), Expect = 2e-12
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 18 tcctctccccattacatcgcaaggccctctctttaa 53
||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcctctccccattacatcgcaaggccctctctttaa 36