Miyakogusa Predicted Gene

Lj1g3v3438900.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v3438900.1 Non Chatacterized Hit- tr|K4B8K1|K4B8K1_SOLLC
Uncharacterized protein OS=Solanum lycopersicum GN=Sol,37.59,4e-19,no
description,Zinc finger, RING/FYVE/PHD-type; seg,NULL; RINGv,Zinc
finger, RING-CH-type; ZF_RING_C,CUFF.30675.1
         (711 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS316307 similar to UniRef100_A7PIE0 Cluster: Chromosom...   103   1e-21

>gnl|LJGI|FS316307 similar to UniRef100_A7PIE0 Cluster: Chromosome chr13 scaffold_17,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr13 scaffold_17, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (39%)
          Length = 737

 Score =  103 bits (52), Expect = 1e-21
 Identities = 82/92 (89%)
 Strand = Plus / Plus

                                                                       
Query: 373 tctggtcctcccattgaattgggttgttcttgtaaggatgatttagctgctgctcacaag 432
           |||||| ||||||||||  |||| |||||||| ||||||||||| |||||||||||||| 
Sbjct: 591 tctggtactcccattgagctggggtgttcttgcaaggatgatttggctgctgctcacaaa 650

                                           
Query: 433 cactgtgctgaggcctggttcaagattaaggg 464
           || ||||||||||| ||||||||||| |||||
Sbjct: 651 cagtgtgctgaggcttggttcaagatcaaggg 682