Miyakogusa Predicted Gene
- Lj1g3v3404350.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3404350.1 Non Chatacterized Hit- tr|I1K789|I1K789_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,89.51,0,RNA
recognition motif,RNA recognition motif domain; seg,NULL; SUBFAMILY
NOT NAMED,NULL; FAMILY NOT N,CUFF.30635.1
(852 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC73162 similar to UniRef100_A7QPG9 Cluster: Chromosome... 1142 0.0
gnl|LJGI|FS329862 homologue to UniRef100_A7QPG9 Cluster: Chromos... 381 e-105
gnl|LJGI|TC74081 similar to UniRef100_Q21QW7 Cluster: C4-dicarbo... 113 2e-24
gnl|LJGI|GO019513 homologue to UniRef100_A7PXT0 Cluster: Chromos... 74 2e-12
gnl|LJGI|TC66668 similar to UniRef100_A7PIB0 Cluster: Chromosome... 54 1e-06
>gnl|LJGI|TC73162 similar to UniRef100_A7QPG9 Cluster: Chromosome chr18 scaffold_137,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_137, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (62%)
Length = 1141
Score = 1142 bits (576), Expect = 0.0
Identities = 579/580 (99%)
Strand = Plus / Plus
Query: 273 agctcctgtcattgatggtagaagggctaattgtaacttggcttcacttggtcgaccacg 332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 agctcctgtcattgatggtagaagggctaattgtaacttggcttcacttggtcgaccacg 62
Query: 333 cccacctcttccctatggtcggataagaccagcctcccattatgttggaagtttgcaacc 392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 cccacctcttccctatggtcggataagaccagcctcccattatgttggaagtttgcaacc 122
Query: 393 agcacgtggttcttatgttggaggttttggctaccagcagcagccactttcctacggcta 452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 agcacgtggttcttatgttggaggttttggctaccagcagcagccactttcctacggcta 182
Query: 453 tcaacaaggattggtatatcctccttatgggtatacgacgtatggacctgaatacatcta 512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 tcaacaaggattggtatatcctccttatgggtatacgacgtatggacctgaatacatcta 242
Query: 513 cccacagaatgtgtacaacccatatgtgggtcagcagtaccttcagatatatggagtgcc 572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 cccacagaatgtgtacaacccatatgtgggtcagcagtaccttcagatatatggagtgcc 302
Query: 573 tggggcagtgaacactactgtttatccttatggacaattgggtcagactattcctagtgg 632
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 tggggcagtgaacactactgtttatccttatggacaattgggtcagactattcctagtgg 362
Query: 633 tcacggttatacagcaatgccaggttatactgtaccagctcatcagattgtgccgtacgg 692
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 tcgcggttatacagcaatgccaggttatactgtaccagctcatcagattgtgccgtacgg 422
Query: 693 cggatccagtgttaattccataacaacttcacctatgcctgccattcaagcatcatatcc 752
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 cggatccagtgttaattccataacaacttcacctatgcctgccattcaagcatcatatcc 482
Query: 753 tagtggaatagcttcaccagttccaggccaaccccaatttattgttcctgctccttctca 812
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 tagtggaatagcttcaccagttccaggccaaccccaatttattgttcctgctccttctca 542
Query: 813 atttatgcaaggtggtggtcatgaccaaacagccgggtga 852
||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 atttatgcaaggtggtggtcatgaccaaacagccgggtga 582
>gnl|LJGI|FS329862 homologue to UniRef100_A7QPG9 Cluster: Chromosome chr18
scaffold_137, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr18 scaffold_137, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (22%)
Length = 724
Score = 381 bits (192), Expect = e-105
Identities = 192/192 (100%)
Strand = Plus / Plus
Query: 1 atggcgtaccaggcgattcagggttcgagttcaggatcgagttcggggtttcaaatggtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 atggcgtaccaggcgattcagggttcgagttcaggatcgagttcggggtttcaaatggtg 592
Query: 61 aattctccgttcggtgacaccactttcaccaaggtcttcgttggtggattggcttgggag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 aattctccgttcggtgacaccactttcaccaaggtcttcgttggtggattggcttgggag 652
Query: 121 actcagagtgaaaccatgcgtcgttactttgagcaattcggggagattcttgaggcggtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 actcagagtgaaaccatgcgtcgttactttgagcaattcggggagattcttgaggcggtt 712
Query: 181 gtgatcactgat 192
||||||||||||
Sbjct: 713 gtgatcactgat 724
>gnl|LJGI|TC74081 similar to UniRef100_Q21QW7 Cluster: C4-dicarboxylate
transporter/malic acid transport protein; n=1;
Rhodoferax ferrireducens T118|Rep: C4-dicarboxylate
transporter/malic acid transport protein - Rhodoferax
ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118),
partial (7%)
Length = 1165
Score = 113 bits (57), Expect = 2e-24
Identities = 57/57 (100%)
Strand = Plus / Plus
Query: 796 gttcctgctccttctcaatttatgcaaggtggtggtcatgaccaaacagccgggtga 852
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gttcctgctccttctcaatttatgcaaggtggtggtcatgaccaaacagccgggtga 57
>gnl|LJGI|GO019513 homologue to UniRef100_A7PXT0 Cluster: Chromosome chr15
scaffold_37, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr15 scaffold_37, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (46%)
Length = 749
Score = 73.8 bits (37), Expect = 2e-12
Identities = 124/153 (81%)
Strand = Plus / Plus
Query: 75 tgacaccactttcaccaaggtcttcgttggtggattggcttgggagactcagagtgaaac 134
|||||| || || |||||| |||| ||||| || | |||||||||||||| || |||||
Sbjct: 502 tgacacaacatttaccaagctctttgttggagggctagcttgggagactcaaagggaaac 561
Query: 135 catgcgtcgttactttgagcaattcggggagattcttgaggcggttgtgatcactgataa 194
|||| | | |||||||||||||| || ||||| | ||||| ||||| ||||| |||||
Sbjct: 562 catgaggaggtactttgagcaatttggagagatcttagaggctgttgtcatcacagataa 621
Query: 195 gaacactgggcgatccaaaggctatggttttgt 227
||| || ||| ||||||| || ||||| |||||
Sbjct: 622 gaatacagggagatccaagggttatggctttgt 654
>gnl|LJGI|TC66668 similar to UniRef100_A7PIB0 Cluster: Chromosome chr13 scaffold_17,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_17, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (32%)
Length = 1377
Score = 54.0 bits (27), Expect = 1e-06
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 188 ctgataagaacactgggcgatccaaaggctatggttttgtgac 230
|||||||| |||||| |||||||||||||||||||||||||
Sbjct: 452 ctgataagctcactggcagatccaaaggctatggttttgtgac 494