Miyakogusa Predicted Gene
- Lj1g3v3404340.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3404340.1 tr|G7J6G8|G7J6G8_MEDTR SWI/SNF complex subunit
SMARCC2 OS=Medicago truncatula GN=MTR_3g116120 PE=4
S,71.08,0,PREDICTED PROTEIN,NULL; SWI/SNF COMPLEX-RELATED,NULL;
SWIRM,SWIRM domain; Myb_DNA-binding,SANT/Myb d,CUFF.30634.1
(1431 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC70501 similar to UniRef100_A7QPG8 Cluster: Chromosome... 2639 0.0
>gnl|LJGI|TC70501 similar to UniRef100_A7QPG8 Cluster: Chromosome chr18 scaffold_137,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_137, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (68%)
Length = 1704
Score = 2639 bits (1331), Expect = 0.0
Identities = 1340/1343 (99%)
Strand = Plus / Plus
Query: 89 ttcaccaaccacagccagcgaaacccgacgccccaccgtcggaacccaaactctccgcca 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 ttcaccaaccacagccagcgaaacccgacgccccaccgtcggaacccaaactctccgcca 186
Query: 149 ctccagacgctaacgtaatcctggtccccagccactccagatggttctcgtgggattcaa 208
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 ctccagacgctaacgtaatcctggtccccagccactccagatggttctcgtgggattcaa 246
Query: 209 ttcaccaatgcgaggttcgtcacctccctgagttcttcgattcctcttccaagagcccta 268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 ttcaccaatgcgaggttcgtcacctccctgagttcttcgattcctcttccaagagcccta 306
Query: 269 gggtttacaaatactacagaaactccatcatcaagtacttccgatacaatcccaatcgga 328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 gggtttacaaatactacagaaactccatcatcaagtacttccgatacaatcccaatcgga 366
Query: 329 aaatcaccttcaccgatgtccgcaaaatgctcgtcggagacgtcggttcaatccgcagag 388
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 367 aaatcaccttcaccgatgtccgcaaaacgctcgtcggagacgtcggttcaatccgcagag 426
Query: 389 tgttcgagtttcttgaagcgtggggtttgattaactaccacccctcttcgtcgtttagca 448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 tgttcgagtttcttgaagcgtggggtttgattaactaccacccctcttcgtcgtttagca 486
Query: 449 aacccttcaagtgggatgataaagataccaaggttgattctgctgaacctcctcctcctc 508
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 487 aacccttcaagtgggatgatgaagataccaaggttgattctgctgaacctcctcctcctc 546
Query: 509 ctgttcgtgaaaccgctaagagagtctgcagtggctgcaaagccctctgcaccattgctt 568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 ctgttcgtgaaaccgctaagagagtctgcagtggctgcaaagccctctgcaccattgctt 606
Query: 569 gctttgtctgtgataagtatgatttgactctgtgtgcgaggtgttatgttcggggcaact 628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 gctttgtctgtgataagtatgatttgactctgtgtgcgaggtgttatgttcggggcaact 666
Query: 629 atagagttggtgtgagttcgtcggattttaagcgagtggagataagtgaggagacgaaga 688
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 atagagttggtgtgagttcgtcggattttaagcgagtggagataagtgaggagacgaaga 726
Query: 689 cggagtggactgagaaggaaaccttgaatcttgtagaagccatttcgcattatggggatg 748
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 cggagtggactgagaaggaaaccttgaatcttgtagaagccatttcgcattatggggatg 786
Query: 749 actggaagagggtatctcatcaggttgttggcaggacggagaaggagtgtgttgctcatt 808
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 787 actggaagagggtatctcatcaggttgttggcaggacggagaaggagtgtgttgatcatt 846
Query: 809 ttctgaagcttccttttggggagcaattcctaggctctgctgtgagtgatgatggttgtg 868
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 847 ttctgaagcttccttttggggagcaattcctaggctctgctgtgagtgatgatggttgtg 906
Query: 869 agttgaaacagcatgctgatgaatcggaaactgttgcctccgctgaatctaataagagaa 928
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 907 agttgaaacagcatgctgatgaatcggaaactgttgcctccgctgaatctaataagagaa 966
Query: 929 tgcgtctcacacctcttgcggatgcaagcaatcctattatggctcaggctgctttcctgt 988
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 967 tgcgtctcacacctcttgcggatgcaagcaatcctattatggctcaggctgctttcctgt 1026
Query: 989 ctgctttggcagggccagaggttgcacaagctgctgctcaagctgcactgacaactttgt 1048
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1027 ctgctttggcagggccagaggttgcacaagctgctgctcaagctgcactgacaactttgt 1086
Query: 1049 ccgacgtttacaagtcaactagaataaattatcggtcacttccaaagaatacattgcagc 1108
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1087 ccgacgtttacaagtcaactagaataaattatcggtcacttccaaagaatacattgcagc 1146
Query: 1109 aagatgctggtgtcgcatctaatggtggtaataattcagattcattgcaaggagctcgat 1168
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1147 aagatgctggtgtcgcatctaatggtggtaataattcagattcattgcaaggagctcgat 1206
Query: 1169 tgaatgcaagtttacagcttgagaaggatgaatcagatgtggaaaaggcaatttctgaga 1228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1207 tgaatgcaagtttacagcttgagaaggatgaatcagatgtggaaaaggcaatttctgaga 1266
Query: 1229 ttatagaagttcagatgaaaaatatccaagacaagcttgttcattttgaagatttggacc 1288
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1267 ttatagaagttcagatgaaaaatatccaagacaagcttgttcattttgaagatttggacc 1326
Query: 1289 tgctgatggaaaaagaaaggcagcagttagagcaaacgaagaatatgtttttccttgatc 1348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1327 tgctgatggaaaaagaaaggcagcagttagagcaaacgaagaatatgtttttccttgatc 1386
Query: 1349 agcttactcttttatttcaaaaaccatctgcaccaaagactggagaatatccacaaggca 1408
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1387 agcttactcttttatttcaaaaaccatctgcaccaaagactggagaatatccacaaggca 1446
Query: 1409 atcatgtaaagacgacgacttaa 1431
|||||||||||||||||||||||
Sbjct: 1447 atcatgtaaagacgacgacttaa 1469
Score = 63.9 bits (32), Expect = 3e-09
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 1 atggcgacaaagtccccaaccaccgccactga 32
||||||||||||||||||||||||||||||||
Sbjct: 39 atggcgacaaagtccccaaccaccgccactga 70