Miyakogusa Predicted Gene

Lj1g3v3392210.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v3392210.1 tr|F2NFK9|F2NFK9_DESAR Biotin/lipoate A/B protein
ligase OS=Desulfobacca acetoxidans (strain ATCC
70,30.38,1.1,seg,NULL,CUFF.32053.1
         (364 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC75527 homologue to UniRef100_A7QPF4 Cluster: Chromoso...   161   4e-39
gnl|LJGI|BP069452 similar to UniRef100_A7QPF4 Cluster: Chromosom...   119   1e-26

>gnl|LJGI|TC75527 homologue to UniRef100_A7QPF4 Cluster: Chromosome chr18
           scaffold_137, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr18 scaffold_137, whole
           genome shotgun sequence - Vitis vinifera (Grape),
           partial (19%)
          Length = 598

 Score =  161 bits (81), Expect = 4e-39
 Identities = 83/84 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggtcaaggttggcaaaagcaactcgactgttgagatgtgcggaaaggtttaccgctta 60
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 atggtcaangttggcaaaagcaactcgactgttgagatgtgcggaaaggtttaccgctta 574

                                   
Query: 61  gccccggttacgcttactcaagag 84
           ||||||||||||||||||||||||
Sbjct: 575 gccccggttacgcttactcaagag 598


>gnl|LJGI|BP069452 similar to UniRef100_A7QPF4 Cluster: Chromosome chr18 scaffold_137,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_137, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (12%)
          Length = 491

 Score =  119 bits (60), Expect = 1e-26
 Identities = 60/60 (100%)
 Strand = Plus / Minus

                                                                       
Query: 284 gagttcctttccgcattcaagccgagcatgaagccctgcagagaaagctggaagcccttc 343
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 gagttcctttccgcattcaagccgagcatgaagccctgcagagaaagctggaagcccttc 432