Miyakogusa Predicted Gene
- Lj1g3v3385820.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3385820.1 Non Chatacterized Hit- tr|B9S263|B9S263_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,44.36,4e-18,coiled-coil,NULL; seg,NULL,CUFF.30603.1
(498 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62502 similar to UniRef100_A7QPE6 Cluster: Chromosome... 987 0.0
gnl|LJGI|TC57189 similar to UniRef100_A7QPE6 Cluster: Chromosome... 971 0.0
gnl|LJGI|TC82544 similar to UniRef100_A7QPE6 Cluster: Chromosome... 367 e-101
gnl|LJGI|TC79700 similar to UniRef100_A7QPE6 Cluster: Chromosome... 242 2e-63
gnl|LJGI|TC59596 similar to UniRef100_A7PKV2 Cluster: Chromosome... 56 2e-07
>gnl|LJGI|TC62502 similar to UniRef100_A7QPE6 Cluster: Chromosome chr18 scaffold_137,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_137, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (52%)
Length = 783
Score = 987 bits (498), Expect = 0.0
Identities = 498/498 (100%)
Strand = Plus / Plus
Query: 1 atggctgctgctgtttcctcttctttcgtcctcaccaaatccgtgtcatccataaataag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 atggctgctgctgtttcctcttctttcgtcctcaccaaatccgtgtcatccataaataag 198
Query: 61 gtggatcactcacgagtgatgatcaaaccgtccggcttgtcacaaaatctaaattgtcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 gtggatcactcacgagtgatgatcaaaccgtccggcttgtcacaaaatctaaattgtcaa 258
Query: 121 gggagaactcaactatctttgactagaaggcctctaacagttcaagctacatatagtgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 gggagaactcaactatctttgactagaaggcctctaacagttcaagctacatatagtgat 318
Query: 181 ggtggaaggcccagcggtgctagcgtctttgttggtggcttcgtcttgggaggattaata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ggtggaaggcccagcggtgctagcgtctttgttggtggcttcgtcttgggaggattaata 378
Query: 241 gttggcacccttggtgctgtgtatgcacctcagatcagcaaggctttagctggagctgac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 gttggcacccttggtgctgtgtatgcacctcagatcagcaaggctttagctggagctgac 438
Query: 301 aagaaggagttaatgagaaaactgccaaagtttatatatgatgaagaaaaggctttagag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 aagaaggagttaatgagaaaactgccaaagtttatatatgatgaagaaaaggctttagag 498
Query: 361 aaaacacggaaagtactggctgagaagattgaacaattgaatgctgccatagatgaagtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 aaaacacggaaagtactggctgagaagattgaacaattgaatgctgccatagatgaagtt 558
Query: 421 tcctctcagcttcggtcagaggatgagggtcctaatggagtagctgtgaactctgatgaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 tcctctcagcttcggtcagaggatgagggtcctaatggagtagctgtgaactctgatgaa 618
Query: 481 ctagaagctgccgcatga 498
||||||||||||||||||
Sbjct: 619 ctagaagctgccgcatga 636
>gnl|LJGI|TC57189 similar to UniRef100_A7QPE6 Cluster: Chromosome chr18 scaffold_137,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_137, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (52%)
Length = 958
Score = 971 bits (490), Expect = 0.0
Identities = 497/498 (99%), Gaps = 1/498 (0%)
Strand = Plus / Plus
Query: 1 atggctgctgctgtttcctcttctttcgtcctcaccaaatccgtgtcatccataaataag 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 88 atggctgctgctgtttcctct-ctttcgtcctcaccaaatccgtgtcatccataaataag 146
Query: 61 gtggatcactcacgagtgatgatcaaaccgtccggcttgtcacaaaatctaaattgtcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 gtggatcactcacgagtgatgatcaaaccgtccggcttgtcacaaaatctaaattgtcaa 206
Query: 121 gggagaactcaactatctttgactagaaggcctctaacagttcaagctacatatagtgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gggagaactcaactatctttgactagaaggcctctaacagttcaagctacatatagtgat 266
Query: 181 ggtggaaggcccagcggtgctagcgtctttgttggtggcttcgtcttgggaggattaata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 ggtggaaggcccagcggtgctagcgtctttgttggtggcttcgtcttgggaggattaata 326
Query: 241 gttggcacccttggtgctgtgtatgcacctcagatcagcaaggctttagctggagctgac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 gttggcacccttggtgctgtgtatgcacctcagatcagcaaggctttagctggagctgac 386
Query: 301 aagaaggagttaatgagaaaactgccaaagtttatatatgatgaagaaaaggctttagag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 aagaaggagttaatgagaaaactgccaaagtttatatatgatgaagaaaaggctttagag 446
Query: 361 aaaacacggaaagtactggctgagaagattgaacaattgaatgctgccatagatgaagtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 aaaacacggaaagtactggctgagaagattgaacaattgaatgctgccatagatgaagtt 506
Query: 421 tcctctcagcttcggtcagaggatgagggtcctaatggagtagctgtgaactctgatgaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 tcctctcagcttcggtcagaggatgagggtcctaatggagtagctgtgaactctgatgaa 566
Query: 481 ctagaagctgccgcatga 498
||||||||||||||||||
Sbjct: 567 ctagaagctgccgcatga 584
>gnl|LJGI|TC82544 similar to UniRef100_A7QPE6 Cluster: Chromosome chr18 scaffold_137,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_137, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (52%)
Length = 1494
Score = 367 bits (185), Expect = e-101
Identities = 185/185 (100%)
Strand = Plus / Plus
Query: 176 gtgatggtggaaggcccagcggtgctagcgtctttgttggtggcttcgtcttgggaggat 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 gtgatggtggaaggcccagcggtgctagcgtctttgttggtggcttcgtcttgggaggat 449
Query: 236 taatagttggcacccttggtgctgtgtatgcacctcagatcagcaaggctttagctggag 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 taatagttggcacccttggtgctgtgtatgcacctcagatcagcaaggctttagctggag 509
Query: 296 ctgacaagaaggagttaatgagaaaactgccaaagtttatatatgatgaagaaaaggctt 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 ctgacaagaaggagttaatgagaaaactgccaaagtttatatatgatgaagaaaaggctt 569
Query: 356 tagag 360
|||||
Sbjct: 570 tagag 574
Score = 270 bits (136), Expect = 8e-72
Identities = 139/140 (99%)
Strand = Plus / Plus
Query: 359 agaaaacacggaaagtactggctgagaagattgaacaattgaatgctgccatagatgaag 418
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 982 agaaaacacggaaagcactggctgagaagattgaacaattgaatgctgccatagatgaag 1041
Query: 419 tttcctctcagcttcggtcagaggatgagggtcctaatggagtagctgtgaactctgatg 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1042 tttcctctcagcttcggtcagaggatgagggtcctaatggagtagctgtgaactctgatg 1101
Query: 479 aactagaagctgccgcatga 498
||||||||||||||||||||
Sbjct: 1102 aactagaagctgccgcatga 1121
Score = 212 bits (107), Expect = 2e-54
Identities = 107/107 (100%)
Strand = Plus / Plus
Query: 70 tcacgagtgatgatcaaaccgtccggcttgtcacaaaatctaaattgtcaagggagaact 129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tcacgagtgatgatcaaaccgtccggcttgtcacaaaatctaaattgtcaagggagaact 61
Query: 130 caactatctttgactagaaggcctctaacagttcaagctacatatag 176
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 caactatctttgactagaaggcctctaacagttcaagctacatatag 108
>gnl|LJGI|TC79700 similar to UniRef100_A7QPE6 Cluster: Chromosome chr18 scaffold_137,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_137, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 618
Score = 242 bits (122), Expect = 2e-63
Identities = 122/122 (100%)
Strand = Plus / Plus
Query: 377 tggctgagaagattgaacaattgaatgctgccatagatgaagtttcctctcagcttcggt 436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 tggctgagaagattgaacaattgaatgctgccatagatgaagtttcctctcagcttcggt 215
Query: 437 cagaggatgagggtcctaatggagtagctgtgaactctgatgaactagaagctgccgcat 496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 cagaggatgagggtcctaatggagtagctgtgaactctgatgaactagaagctgccgcat 275
Query: 497 ga 498
||
Sbjct: 276 ga 277
>gnl|LJGI|TC59596 similar to UniRef100_A7PKV2 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (57%)
Length = 874
Score = 56.0 bits (28), Expect = 2e-07
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 288 agctggagctgacaagaaggagttaatgagaaaactgccaaagtttatatatgatgaaga 347
|||||||||||||| || || |||||||| ||||| ||||||||||| | |||||||||
Sbjct: 427 agctggagctgacagtaaagatttaatgaggaaacttccaaagtttatgtttgatgaaga 486