Miyakogusa Predicted Gene
- Lj1g3v3385810.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3385810.2 tr|H9U0F7|H9U0F7_9ROSA Glyceraldehyde-3-phosphate
dehydrogenase B OS=Pyrus x bretschneideri
GN=GDPHb,91.19,0,Glyceraldehyde 3-phosphate dehydrogenase,
NA,Glyceraldehyde 3-phosphate dehydrogenase, NAD(P)
bindin,CUFF.30630.2
(957 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60479 homologue to UniRef100_Q38IX0 Cluster: Glyceral... 1897 0.0
gnl|LJGI|TC61208 homologue to UniRef100_Q38IX0 Cluster: Glyceral... 569 e-161
gnl|LJGI|FS339586 homologue to UniRef100_P12859 Cluster: Glycera... 184 7e-46
gnl|LJGI|BW595735 homologue to UniRef100_Q38IX0 Cluster: Glycera... 174 7e-43
gnl|LJGI|TC57598 homologue to UniRef100_Q38IX1 Cluster: Glyceral... 107 1e-22
gnl|LJGI|BW598643 homologue to UniRef100_P09044 Cluster: Glycera... 84 2e-15
gnl|LJGI|AV774594 similar to UniRef100_Q15CX3 Cluster: Glycerald... 52 7e-06
>gnl|LJGI|TC60479 homologue to UniRef100_Q38IX0 Cluster: Glyceraldehyde-3-phosphate
dehydrogenase B subunit; n=1; Glycine max|Rep:
Glyceraldehyde-3-phosphate dehydrogenase B subunit -
Glycine max (Soybean), complete
Length = 1635
Score = 1897 bits (957), Expect = 0.0
Identities = 957/957 (100%)
Strand = Plus / Plus
Query: 1 atgctgggaacttttaaagcagatgtgaaaatactaaatgagaacaccattacagttgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 atgctgggaacttttaaagcagatgtgaaaatactaaatgagaacaccattacagttgat 507
Query: 61 ggtaagcccatcaaggttgtcgcaaacagggaccctcttaagcttccttgggctgagctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 ggtaagcccatcaaggttgtcgcaaacagggaccctcttaagcttccttgggctgagctt 567
Query: 121 ggaattgatattgttattgagggaacaggagtgtttgtggatggccctggtgctggaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 ggaattgatattgttattgagggaacaggagtgtttgtggatggccctggtgctggaaaa 627
Query: 181 cacatccaagcaggtgccaagaaagttatcatcactgctcctgcaaagggtgctgatatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 cacatccaagcaggtgccaagaaagttatcatcactgctcctgcaaagggtgctgatatt 687
Query: 241 ccaacttatgttgttggagtaaatgaaggggactacggtcataatgtcgccgacattata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 ccaacttatgttgttggagtaaatgaaggggactacggtcataatgtcgccgacattata 747
Query: 301 agcaatgcttcttgcaccacaaactgtcttgctcccttcgtgaagatcctggatgaagag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 agcaatgcttcttgcaccacaaactgtcttgctcccttcgtgaagatcctggatgaagag 807
Query: 361 tttggaattgtgaagggaaccatgacaaccacacattcctacacaggagatcagaggctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 808 tttggaattgtgaagggaaccatgacaaccacacattcctacacaggagatcagaggctt 867
Query: 421 ttggatgcttctcacagggacttgagaagagctagggctgcagctctgaacattgtcccc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 868 ttggatgcttctcacagggacttgagaagagctagggctgcagctctgaacattgtcccc 927
Query: 481 accagcaccggagcggccaaggccgtgtctctggtgctgccacagctcaagggaaagctc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 928 accagcaccggagcggccaaggccgtgtctctggtgctgccacagctcaagggaaagctc 987
Query: 541 aatgggattgccctccgcgtgccgacacccaatgtttcggtggttgaccttgtggtgaat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 988 aatgggattgccctccgcgtgccgacacccaatgtttcggtggttgaccttgtggtgaat 1047
Query: 601 gttgagaagaagggtatctcagctgaagatgtcaatgcagcattcagaaaggcagctgaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1048 gttgagaagaagggtatctcagctgaagatgtcaatgcagcattcagaaaggcagctgaa 1107
Query: 661 gggccactgaaaggtgtgttggatgtgtgtgatgttccactggtgtctgtggacttcagg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1108 gggccactgaaaggtgtgttggatgtgtgtgatgttccactggtgtctgtggacttcagg 1167
Query: 721 tgcactgatgtttcttctactattgactcctcattgaccatggtcatgggagatgatatg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1168 tgcactgatgtttcttctactattgactcctcattgaccatggtcatgggagatgatatg 1227
Query: 781 gtcaaagtggttgcttggtatgacaatgaatggggttacagccaaagagtggtggatttg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1228 gtcaaagtggttgcttggtatgacaatgaatggggttacagccaaagagtggtggatttg 1287
Query: 841 gcacatttggttgcaagcaaatggccaggcgcagctgctgcaccagggagtggagaccca 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1288 gcacatttggttgcaagcaaatggccaggcgcagctgctgcaccagggagtggagaccca 1347
Query: 901 ttggaggagttctgcgagacaaacccagctgatgaggaatgcaaactttatgaatag 957
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1348 ttggaggagttctgcgagacaaacccagctgatgaggaatgcaaactttatgaatag 1404
>gnl|LJGI|TC61208 homologue to UniRef100_Q38IX0 Cluster: Glyceraldehyde-3-phosphate
dehydrogenase B subunit; n=1; Glycine max|Rep:
Glyceraldehyde-3-phosphate dehydrogenase B subunit -
Glycine max (Soybean), partial (50%)
Length = 775
Score = 569 bits (287), Expect = e-161
Identities = 287/287 (100%)
Strand = Plus / Plus
Query: 1 atgctgggaacttttaaagcagatgtgaaaatactaaatgagaacaccattacagttgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 atgctgggaacttttaaagcagatgtgaaaatactaaatgagaacaccattacagttgat 548
Query: 61 ggtaagcccatcaaggttgtcgcaaacagggaccctcttaagcttccttgggctgagctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 ggtaagcccatcaaggttgtcgcaaacagggaccctcttaagcttccttgggctgagctt 608
Query: 121 ggaattgatattgttattgagggaacaggagtgtttgtggatggccctggtgctggaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 ggaattgatattgttattgagggaacaggagtgtttgtggatggccctggtgctggaaaa 668
Query: 181 cacatccaagcaggtgccaagaaagttatcatcactgctcctgcaaagggtgctgatatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 cacatccaagcaggtgccaagaaagttatcatcactgctcctgcaaagggtgctgatatt 728
Query: 241 ccaacttatgttgttggagtaaatgaaggggactacggtcataatgt 287
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 ccaacttatgttgttggagtaaatgaaggggactacggtcataatgt 775
>gnl|LJGI|FS339586 homologue to UniRef100_P12859 Cluster: Glyceraldehyde-3-phosphate
dehydrogenase B, chloroplast precursor; n=1; Pisum
sativum|Rep: Glyceraldehyde-3-phosphate dehydrogenase B,
chloroplast precursor - Pisum sativum (Garden pea),
partial (44%)
Length = 779
Score = 184 bits (93), Expect = 7e-46
Identities = 228/273 (83%)
Strand = Plus / Plus
Query: 55 gttgatggtaagcccatcaaggttgtcgcaaacagggaccctcttaagcttccttgggct 114
||||||||||||| |||||| |||||| | ||||| ||||||||| ||||||| ||||||
Sbjct: 480 gttgatggtaagctcatcaaagttgtctccaacagagaccctcttgagcttccatgggct 539
Query: 115 gagcttggaattgatattgttattgagggaacaggagtgtttgtggatggccctggtgct 174
||||| || ||||| |||||||| |||||||||||||||||||| ||||| || || ||
Sbjct: 540 gagctcggcattgacattgttatcgagggaacaggagtgtttgttgatgggccaggagca 599
Query: 175 ggaaaacacatccaagcaggtgccaagaaagttatcatcactgctcctgcaaagggtgct 234
|| || || |||||||| || ||| |||||||||||||||||| || || || ||||||
Sbjct: 600 gggaagcatatccaagccggagcctcgaaagttatcatcactgcaccagccaaaggtgct 659
Query: 235 gatattccaacttatgttgttggagtaaatgaaggggactacggtcataatgtcgccgac 294
||||| || || |||||| | ||||| ||||| ||||| ||||| ||||||| ||
Sbjct: 660 gatatccctacctatgttatgggagtcaatgagcaagactatggtcacgatgtcgctaac 719
Query: 295 attataagcaatgcttcttgcaccacaaactgt 327
||||| |||||||| ||||||||||| ||||||
Sbjct: 720 attattagcaatgcatcttgcaccaccaactgt 752
>gnl|LJGI|BW595735 homologue to UniRef100_Q38IX0 Cluster: Glyceraldehyde-3-phosphate
dehydrogenase B subunit; n=1; Glycine max|Rep:
Glyceraldehyde-3-phosphate dehydrogenase B subunit -
Glycine max (Soybean), partial (35%)
Length = 485
Score = 174 bits (88), Expect = 7e-43
Identities = 88/88 (100%)
Strand = Plus / Plus
Query: 1 atgctgggaacttttaaagcagatgtgaaaatactaaatgagaacaccattacagttgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 atgctgggaacttttaaagcagatgtgaaaatactaaatgagaacaccattacagttgat 374
Query: 61 ggtaagcccatcaaggttgtcgcaaaca 88
||||||||||||||||||||||||||||
Sbjct: 375 ggtaagcccatcaaggttgtcgcaaaca 402
Score = 168 bits (85), Expect = 4e-41
Identities = 85/85 (100%)
Strand = Plus / Plus
Query: 528 caagggaaagctcaatgggattgccctccgcgtgccgacacccaatgtttcggtggttga 587
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 caagggaaagctcaatgggattgccctccgcgtgccgacacccaatgtttcggtggttga 460
Query: 588 ccttgtggtgaatgttgagaagaag 612
|||||||||||||||||||||||||
Sbjct: 461 ccttgtggtgaatgttgagaagaag 485
>gnl|LJGI|TC57598 homologue to UniRef100_Q38IX1 Cluster: Glyceraldehyde-3-phosphate
dehydrogenase A subunit; n=1; Glycine max|Rep:
Glyceraldehyde-3-phosphate dehydrogenase A subunit -
Glycine max (Soybean), complete
Length = 1477
Score = 107 bits (54), Expect = 1e-22
Identities = 90/102 (88%)
Strand = Plus / Plus
Query: 718 aggtgcactgatgtttcttctactattgactcctcattgaccatggtcatgggagatgat 777
|||||||||||||| || || || ||||||| || |||||||||||||||||||||||
Sbjct: 1115 aggtgcactgatgtgtcctcaaccgttgactcatctttgaccatggtcatgggagatgac 1174
Query: 778 atggtcaaagtggttgcttggtatgacaatgaatggggttac 819
||||| || ||| ||||||||||||| |||||||||||||||
Sbjct: 1175 atggtgaaggtgattgcttggtatgataatgaatggggttac 1216
Score = 71.9 bits (36), Expect = 7e-12
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 526 ctcaagggaaagctcaatgggattgccctccgcgtgccgacacccaatgtttcggtggtt 585
||||| || |||||||| || ||||||||||| ||||||||||| || |||||||||||
Sbjct: 926 ctcaaaggcaagctcaacggcattgccctccgtgtgccgacaccaaacgtttcggtggtg 985
Query: 586 gaccttgt 593
||||||||
Sbjct: 986 gaccttgt 993
>gnl|LJGI|BW598643 homologue to UniRef100_P09044 Cluster: Glyceraldehyde-3-phosphate
dehydrogenase B, chloroplast precursor; n=1; Nicotiana
tabacum|Rep: Glyceraldehyde-3-phosphate dehydrogenase B,
chloroplast precursor - Nicotiana tabacum (Common
tobacco), partial (9%)
Length = 133
Score = 83.8 bits (42), Expect = 2e-15
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 880 gcaccagggagtggagacccattggaggagttctgcgagacaaacccagctgatgaggaa 939
|||||||| ||||||||||||||||| |||||||| |||||||| || |||||||||||
Sbjct: 60 gcaccaggaagtggagacccattggatgagttctgtgagacaaatccttctgatgaggaa 119
Query: 940 tgcaaa 945
||||||
Sbjct: 120 tgcaaa 125
>gnl|LJGI|AV774594 similar to UniRef100_Q15CX3 Cluster: Glyceraldehyde-3-phosphate
dehydrogenase; n=1; Helianthus annuus|Rep:
Glyceraldehyde-3-phosphate dehydrogenase - Helianthus
annuus (Common sunflower), partial (32%)
Length = 399
Score = 52.0 bits (26), Expect = 7e-06
Identities = 48/54 (88%), Gaps = 1/54 (1%)
Strand = Plus / Minus
Query: 767 tgggagatgata-tggtcaaagtggttgcttggtatgacaatgaatggggttac 819
|||||||||| | |||| || ||| ||||||||||||| |||||||||||||||
Sbjct: 185 tgggagatgacactggtgaaggtgattgcttggtatgataatgaatggggttac 132