Miyakogusa Predicted Gene

Lj1g3v3384750.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v3384750.1 Non Chatacterized Hit- tr|B9FG32|B9FG32_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,37.04,1e-17,seg,NULL,CUFF.30598.1
         (624 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC73961 similar to UniRef100_A7QPD6 Cluster: Chromosome...  1229   0.0  

>gnl|LJGI|TC73961 similar to UniRef100_A7QPD6 Cluster: Chromosome chr18 scaffold_137,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_137, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (24%)
          Length = 1108

 Score = 1229 bits (620), Expect = 0.0
 Identities = 623/624 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgagttctgtgaacactgaagaaccccaaaaactggaatcggaggctgttgaaggagaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 atgagttctgtgaacactgaagaaccccaaaaactggaatcggaggctgttgaaggagaa 200

                                                                       
Query: 61  gaagaaaatcaacaacttcaactacttgtagctgaggacaaactcgccttgcaattcatg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gaagaaaatcaacaacttcaactacttgtagctgaggacaaactcgccttgcaattcatg 260

                                                                       
Query: 121 gattcagtgcataactacctatccctcttcgatgcattgtcctccacacttggacaggga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gattcagtgcataactacctatccctcttcgatgcattgtcctccacacttggacaggga 320

                                                                       
Query: 181 tggctggatttagctagtgctcgacattccatgggtgcttcacgcattaatagcagttta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tggctggatttagctagtgctcgacattccatgggtgcttcacgcattaatagcagttta 380

                                                                       
Query: 241 ttggacctcaagttccatccagctgctacaacatcaaagatagtcaaataccaaggtgaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttggacctcaagttccatccagctgctacaacatcaaagatagtcaaataccaaggtgaa 440

                                                                       
Query: 301 caaccatgcttcatgttgcgcaaatgggtatcctctgaacatgaaaattctcaactggaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caaccatgcttcatgttgcgcaaatgggtatcctctgaacatgaaaattctcaactggaa 500

                                                                       
Query: 361 gacaagaatgggaagctacaagatagtagtgctgaggtaaccgctgcaaataacttatca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gacaagaatgggaagctacaagatagtagtgctgaggtaaccgctgcaaataacttatca 560

                                                                       
Query: 421 gggcttgcagatgatgaggacgttcaaaaggagcgatccaagtccttatctgtttttgga 480
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gggcttgcagatgatgaggaagttcaaaaggagcgatccaagtccttatctgtttttgga 620

                                                                       
Query: 481 attttaatttcccccaagcttcgatccacacagctttcatttgagaaagcactagaaacc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 attttaatttcccccaagcttcgatccacacagctttcatttgagaaagcactagaaacc 680

                                                                       
Query: 541 ctcatagaattagcaaatatgcgttcatcattgatacattcttttcaccaacttcatcga 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctcatagaattagcaaatatgcgttcatcattgatacattcttttcaccaacttcatcga 740

                                   
Query: 601 gagacggaagatactgaagaatga 624
           ||||||||||||||||||||||||
Sbjct: 741 gagacggaagatactgaagaatga 764