Miyakogusa Predicted Gene

Lj1g3v3382460.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v3382460.1 Non Chatacterized Hit- tr|F6HPY1|F6HPY1_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,94.37,2e-19,RS25A_ARATH_Q9SIK2;,Ribosomal protein S25; SUBFAMILY
NOT NAMED,NULL; FAMILY NOT NAMED,Ribosomal prot,CUFF.30602.1
         (330 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC66012                                                      654   0.0  
gnl|LJGI|TC65807 homologue to UniRef100_A7QUW2 Cluster: Chromoso...   420   e-117

>gnl|LJGI|TC66012 
          Length = 607

 Score =  654 bits (330), Expect = 0.0
 Identities = 330/330 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggctccaaagaaggataaggctcctccaccttcctctaagcccgccaagtccggcggt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88  atggctccaaagaaggataaggctcctccaccttcctctaagcccgccaagtccggcggt 147

                                                                       
Query: 61  ggcaagcagaagaagaagaagtggagcaagggaaagcaaaaggagaaggttaacaacatg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 ggcaagcagaagaagaagaagtggagcaagggaaagcaaaaggagaaggttaacaacatg 207

                                                                       
Query: 121 gtgctctttgaccaggggacttatgacaagctcctctccgaggcacccaaattcaagctc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 gtgctctttgaccaggggacttatgacaagctcctctccgaggcacccaaattcaagctc 267

                                                                       
Query: 181 atcacgccttccattctctctgatcgtttgagggtcaatggatcacttgcaaggaaggct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 atcacgccttccattctctctgatcgtttgagggtcaatggatcacttgcaaggaaggct 327

                                                                       
Query: 241 atcagagagttgatggctagaggttcaatcaggatggtttcttcccatgcaagtcagcaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 atcagagagttgatggctagaggttcaatcaggatggtttcttcccatgcaagtcagcaa 387

                                         
Query: 301 atttacactagagctacaaatacctagatg 330
           ||||||||||||||||||||||||||||||
Sbjct: 388 atttacactagagctacaaatacctagatg 417


>gnl|LJGI|TC65807 homologue to UniRef100_A7QUW2 Cluster: Chromosome chr13
           scaffold_181, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr13 scaffold_181, whole
           genome shotgun sequence - Vitis vinifera (Grape),
           partial (96%)
          Length = 665

 Score =  420 bits (212), Expect = e-117
 Identities = 293/320 (91%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggctccaaagaaggataaggctcctccaccttcctctaagcccgccaagtccggcggt 60
           |||||||||||||||||||||||||| ||||||||||| ||||||||||| || ||||||
Sbjct: 71  atggctccaaagaaggataaggctcccccaccttcctccaagcccgccaaatctggcggt 130

                                                                       
Query: 61  ggcaagcagaagaagaagaagtggagcaagggaaagcaaaaggagaaggttaacaacatg 120
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 131 ggcaagcagaagaagaagaagtggagcaagggaaagcaaaaggagaaggtcaacaacatg 190

                                                                       
Query: 121 gtgctctttgaccaggggacttatgacaagctcctctccgaggcacccaaattcaagctc 180
           ||| | ||||| ||||| || ||||||||||| ||||| || || ||||||||||| |||
Sbjct: 191 gtgttgtttgatcagggcacctatgacaagcttctctctgaagcgcccaaattcaaactc 250

                                                                       
Query: 181 atcacgccttccattctctctgatcgtttgagggtcaatggatcacttgcaaggaaggct 240
           ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 251 atcactccttccattctctctgatcgtttgagggttaatggatcacttgcaaggagggct 310

                                                                       
Query: 241 atcagagagttgatggctagaggttcaatcaggatggtttcttcccatgcaagtcagcaa 300
           || |||||  |||||||||||||||||||||||||||||||| |||| ||||| ||||| 
Sbjct: 311 ataagagaactgatggctagaggttcaatcaggatggtttctgcccacgcaagccagcag 370

                               
Query: 301 atttacactagagctacaaa 320
           |||||||| || ||||||||
Sbjct: 371 atttacaccagggctacaaa 390