Miyakogusa Predicted Gene
- Lj1g3v3381250.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3381250.1 Non Chatacterized Hit- tr|H9VTW9|H9VTW9_PINTA
Uncharacterized protein (Fragment) OS=Pinus taeda GN=0,43.17,3e-17,no
description,Zinc finger, RING/FYVE/PHD-type; SUBFAMILY NOT NAMED,NULL;
FAMILY NOT NAMED,NULL; ZF_,CUFF.30567.1
(1293 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC64403 similar to UniRef100_A7P8W6 Cluster: Chromosome... 908 0.0
gnl|LJGI|TC82014 similar to UniRef100_A7P8W6 Cluster: Chromosome... 652 0.0
gnl|LJGI|DC595222 414 e-115
gnl|LJGI|TC61774 weakly similar to UniRef100_A7P8W6 Cluster: Chr... 212 4e-54
gnl|LJGI|BW625796 weakly similar to UniRef100_A7P8W6 Cluster: Ch... 198 6e-50
gnl|LJGI|TC71632 similar to UniRef100_A7P8W6 Cluster: Chromosome... 153 3e-36
>gnl|LJGI|TC64403 similar to UniRef100_A7P8W6 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 721
Score = 908 bits (458), Expect = 0.0
Identities = 472/474 (99%), Gaps = 2/474 (0%)
Strand = Plus / Plus
Query: 1 atgggtgctgcttgttgtgttgctgccaaagataaaactgtacaaagtggatcaaccagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 atgggtgctgcttgttgtgttgctgccaaagataaaactgtacaaagtggatcaaccagt 309
Query: 61 gaggtattgcataggaatactcgttgttctccgacatggagctttaggtgggatcatcgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gaggtattgcataggaatactcgttgttctccgacatggagctttaggtgggatcatcgt 369
Query: 121 ggagggcgtgtagccggtgaagatacatctataaattggttttctgatggaatcagcaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 ggagggcgtgtagccggtgaagatacatctataaattggttttctgatggaatcagcaga 429
Query: 181 aatgatggatcagagaataaaaatgaatcggcgtatgtctccgaggatggaagtccattg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 aatgatggatcagagaataaaaatgaatcggcgtatgtctccgaggatggaagtccattg 489
Query: 241 cagaattatcaacggaacagatgcctaaaatcccctatttctgaaggaactaatgtacat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 cagaattatcaacggaacagatgcctaaaatcccctatttctgaaggaactaatgtacat 549
Query: 301 gtgagaaattcacctacagaccaatctatttcaaggactgtctctatggatatgaacgtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 gtgagaaattcacctacagaccaatctatttcaaggactgtctctatggatatgaacgtg 609
Query: 361 gaacaggggaatgagttgactgaatcatcaatagtatcttgtccatctcccacaaaacca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 gaacaggggaatgagttgactgaatcatcaatagtatcttgtccatctcccacaaaacca 669
Query: 421 tcattgccttcaacttcattgtcagcatctcctttatcatcccaatgtcacatg 474
||||||||||| ||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 670 tcattgccttc-acttcattgtcagcatctcctttatcatccc-atgtcacatg 721
>gnl|LJGI|TC82014 similar to UniRef100_A7P8W6 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (25%)
Length = 753
Score = 652 bits (329), Expect = 0.0
Identities = 329/329 (100%)
Strand = Plus / Plus
Query: 965 tgtgcacttttggtgagaaacaagctatgaagttggctgaaaaagctttgaaagctgaaa 1024
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgtgcacttttggtgagaaacaagctatgaagttggctgaaaaagctttgaaagctgaaa 60
Query: 1025 tggatgtgaaggctagaaacaagaaatcaaagaatcgggttgtggacagtgatattgatg 1084
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tggatgtgaaggctagaaacaagaaatcaaagaatcgggttgtggacagtgatattgatg 120
Query: 1085 atgattctgttgtgtccgatcacctcaaagggagagggcttaaaggtaaaggacctaggg 1144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atgattctgttgtgtccgatcacctcaaagggagagggcttaaaggtaaaggacctaggg 180
Query: 1145 ctgactccagttccagtgggaaaagctcctttgggaaaccttttttgaggcgacacttta 1204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctgactccagttccagtgggaaaagctcctttgggaaaccttttttgaggcgacacttta 240
Query: 1205 cgttcggctcaaagggttccagatccatgttagataatcaccccacaagaaagaagggtt 1264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cgttcggctcaaagggttccagatccatgttagataatcaccccacaagaaagaagggtt 300
Query: 1265 tcttttgggcaaaatctagcaaacaataa 1293
|||||||||||||||||||||||||||||
Sbjct: 301 tcttttgggcaaaatctagcaaacaataa 329
>gnl|LJGI|DC595222
Length = 510
Score = 414 bits (209), Expect = e-115
Identities = 209/209 (100%)
Strand = Plus / Plus
Query: 1 atgggtgctgcttgttgtgttgctgccaaagataaaactgtacaaagtggatcaaccagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 atgggtgctgcttgttgtgttgctgccaaagataaaactgtacaaagtggatcaaccagt 361
Query: 61 gaggtattgcataggaatactcgttgttctccgacatggagctttaggtgggatcatcgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gaggtattgcataggaatactcgttgttctccgacatggagctttaggtgggatcatcgt 421
Query: 121 ggagggcgtgtagccggtgaagatacatctataaattggttttctgatggaatcagcaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 ggagggcgtgtagccggtgaagatacatctataaattggttttctgatggaatcagcaga 481
Query: 181 aatgatggatcagagaataaaaatgaatc 209
|||||||||||||||||||||||||||||
Sbjct: 482 aatgatggatcagagaataaaaatgaatc 510
>gnl|LJGI|TC61774 weakly similar to UniRef100_A7P8W6 Cluster: Chromosome chr3
scaffold_8, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr3 scaffold_8, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (31%)
Length = 790
Score = 212 bits (107), Expect = 4e-54
Identities = 398/493 (80%), Gaps = 9/493 (1%)
Strand = Plus / Plus
Query: 1 atgggtgctgcttgttgtgttgctgccaaagataaaactgtacaaagtggatcaaccagt 60
|||||||| || ||||||||||| ||||||||||||||| ||||||| || ||||||||
Sbjct: 35 atgggtgcggcctgttgtgttgcagccaaagataaaactatacaaagcggtccaaccagt 94
Query: 61 gaggtattgcataggaatactcgttgttctccgacatggagctttaggtgggatcatcgt 120
|| | ||||| |||||| ||| ||||| |||||||||||||| |||||||||||||
Sbjct: 95 gaaatcttgcaacggaatattcgatgttccccgacatggagcttccggtgggatcatcg- 153
Query: 121 ggagggcgtgtagccggtgaagatacatctataaattggttttctgatggaatcagcaga 180
||| ||||| || ||||||||||| ||||||||||||||||||||||| || | |||
Sbjct: 154 --aggtcgtgttgctggtgaagatacttctataaattggttttctgatggtattaacagg 211
Query: 181 aatgatggatcagagaataaaaatgaatcggcgtatgtctccgaggatggaagtccattg 240
||||| ||| ||||||||||||||||| | |||| || ||||||||||| || |||
Sbjct: 212 aatgacagattggagaataaaaatgaatcatcatatgcatcagaggatggaagccccttg 271
Query: 241 cagaattatcaacggaacagatgcctaaaatcccctatttctgaaggaactaatgtacat 300
|||||||||||| |||| ||||| | |||||||| || |||||||||||| || |||
Sbjct: 272 cagaattatcaaaggaatagatggcagaaatccccaatctctgaaggaactgctggacac 331
Query: 301 gtgagaaattcacctacagaccaatctatttcaaggactgtctctatggatatgaacgtg 360
| || ||||| || | || |||||||||||||| | || || |||||| ||| | |
Sbjct: 332 gggataaattattcttctgatcaatctatttcaagaaacgtttccatggatgtgagcatt 391
Query: 361 gaacaggggaatgagttgactgaatcatcaatagtatcttgtccatctcccacaaaac-- 418
||||||||||| ||||| ||| |||| |||||| ||| | |||||||||||||
Sbjct: 392 gaacaggggaagcagttggtagaaccatcctcagtatcatgttcttctcccacaaaacat 451
Query: 419 -ca---tcattgccttcaacttcattgtcagcatctcctttatcatcccaatgtcacatg 474
|| ||||||||||||||||||||||||| ||||||| | |||||| ||||| ||
Sbjct: 452 tcacattcattgccttcaacttcattgtcagtatctcctctgccatcccctagtcacctg 511
Query: 475 cttccatccagct 487
| |||||||||||
Sbjct: 512 cctccatccagct 524
>gnl|LJGI|BW625796 weakly similar to UniRef100_A7P8W6 Cluster: Chromosome chr3
scaffold_8, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr3 scaffold_8, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (26%)
Length = 487
Score = 198 bits (100), Expect = 6e-50
Identities = 243/290 (83%), Gaps = 3/290 (1%)
Strand = Plus / Plus
Query: 2 tgggtgctgcttgttgtgttgctgccaaagataaaactgtacaaagtggatcaaccagtg 61
||||||| || ||||||||||| ||||||||||||||| ||||||| || |||||||||
Sbjct: 76 tgggtgcggcctgttgtgttgcagccaaagataaaactatacaaagcggtccaaccagtg 135
Query: 62 aggtattgcataggaatactcgttgttctccgacatggagctttaggtgggatcatcgtg 121
| | ||||| |||||| ||| ||||| |||||||||||||| |||||||||||||
Sbjct: 136 aaatcttgcaacggaatattcgatgttccccgacatggagcttccggtgggatcatcg-- 193
Query: 122 gagggcgtgtagccggtgaagatacatctataaattggttttctgatggaatcagcagaa 181
||| ||||| || ||||||||||| ||||||||||||||||||||||| || | ||| |
Sbjct: 194 -aggtcgtgttgctggtgaagatacttctataaattggttttctgatggtattaacagga 252
Query: 182 atgatggatcagagaataaaaatgaatcggcgtatgtctccgaggatggaagtccattgc 241
|||| ||| ||||||||||||||||| | |||| || ||||||||||| || ||||
Sbjct: 253 atgacagattggagaataaaaatgaatcatcatatgcatcagaggatggaagccccttgc 312
Query: 242 agaattatcaacggaacagatgcctaaaatcccctatttctgaaggaact 291
||||||||||| |||| ||||| | |||||||| || ||||||||||||
Sbjct: 313 agaattatcaaaggaatagatggcagaaatccccaatctctgaaggaact 362
>gnl|LJGI|TC71632 similar to UniRef100_A7P8W6 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (13%)
Length = 679
Score = 153 bits (77), Expect = 3e-36
Identities = 224/273 (82%)
Strand = Plus / Plus
Query: 1014 gaaagctgaaatggatgtgaaggctagaaacaagaaatcaaagaatcgggttgtggacag 1073
|||||||||||| || ||| ||||||||| |||||||||| ||| || ||||||||||
Sbjct: 1 gaaagctgaaatagaattgagggctagaaataagaaatcaaggaaccgaattgtggacag 60
Query: 1074 tgatattgatgatgattctgttgtgtccgatcacctcaaagggagagggcttaaaggtaa 1133
||||||||||||||||| |||||||| ||| || |||||| |||||| || ||||
Sbjct: 61 tgatattgatgatgattatgttgtgtttgataacttcaaagatagagggtgccaaagtaa 120
Query: 1134 aggacctagggctgactccagttccagtgggaaaagctcctttgggaaaccttttttgag 1193
||| ||||| || | ||||| ||||||| |||||| ||||||||||||| |||
Sbjct: 121 aggtcctagaatggagtgtagttcgagtgggagaagctctactgggaaaccttttctgaa 180
Query: 1194 gcgacactttacgttcggctcaaagggttccagatccatgttagataatcaccccacaag 1253
| ||||||| | || ||||| |||||||||| || |||||||||||||||||| ||| |
Sbjct: 181 gagacacttctcatttggctccaagggttccaaatgcatgttagataatcacccaacacg 240
Query: 1254 aaagaagggtttcttttgggcaaaatctagcaa 1286
||||||||| || ||||||||||| ||||||||
Sbjct: 241 aaagaagggcttattttgggcaaagtctagcaa 273