Miyakogusa Predicted Gene
- Lj1g3v3368890.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v3368890.2 tr|Q24BQ3|Q24BQ3_TETTS Zinc knuckle family
protein OS=Tetrahymena thermophila (strain SB210)
GN=TTHE,29.83,6e-19,ZF_CCHC,Zinc finger, CCHC-type; zinc finger,Zinc
finger, CCHC-type; seg,NULL; no description,Zinc fi,CUFF.30600.2
(792 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58333 similar to UniRef100_A7P7X8 Cluster: Chromosome... 1114 0.0
gnl|LJGI|BW595772 similar to UniRef100_A7P7X8 Cluster: Chromosom... 801 0.0
gnl|LJGI|BW622142 similar to UniRef100_A7P7X8 Cluster: Chromosom... 438 e-122
gnl|LJGI|TC77578 similar to UniRef100_A7P7X8 Cluster: Chromosome... 289 1e-77
>gnl|LJGI|TC58333 similar to UniRef100_A7P7X8 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (74%)
Length = 794
Score = 1114 bits (562), Expect = 0.0
Identities = 562/562 (100%)
Strand = Plus / Plus
Query: 1 atgagttcagacagccgcagccgaagcagaagcaggagcaggagcccaatggaccgtaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 atgagttcagacagccgcagccgaagcagaagcaggagcaggagcccaatggaccgtaag 292
Query: 61 atccggtctgaccgattctcctatcgtgatgcaccttacaggagagattcacgtcggggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 atccggtctgaccgattctcctatcgtgatgcaccttacaggagagattcacgtcggggt 352
Query: 121 ttcagccgagacaatttgtgcaagaactgcaagaggccaggtcattttgctagagaatgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 ttcagccgagacaatttgtgcaagaactgcaagaggccaggtcattttgctagagaatgc 412
Query: 181 cctaatgttgctatttgccacaactgtggcctcccagggcacattgcttcagaatgcacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 cctaatgttgctatttgccacaactgtggcctcccagggcacattgcttcagaatgcacc 472
Query: 241 acaaagtcgctgtgctggaattgtaaggaacctggccacatggcaagcagttgtccaaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 acaaagtcgctgtgctggaattgtaaggaacctggccacatggcaagcagttgtccaaat 532
Query: 301 gagggcatttgccacacctgtggcaaagttggacaccgtgctagggagtgctcagctcct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 gagggcatttgccacacctgtggcaaagttggacaccgtgctagggagtgctcagctcct 592
Query: 361 cctatgcctccaggggacttgaggttgtgcaacaactgttataagcagggccatattgca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 cctatgcctccaggggacttgaggttgtgcaacaactgttataagcagggccatattgca 652
Query: 421 gttgaatgtactaatgagaaggcgtgcaacaactgtaggaagacaggtcacctcgcacgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 gttgaatgtactaatgagaaggcgtgcaacaactgtaggaagacaggtcacctcgcacgt 712
Query: 481 gattgtccaaatgatcccatctgcaacttgtgcaatgtttctgggcatgtggctagacag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 gattgtccaaatgatcccatctgcaacttgtgcaatgtttctgggcatgtggctagacag 772
Query: 541 tgtccaaaatccaacattctag 562
||||||||||||||||||||||
Sbjct: 773 tgtccaaaatccaacattctag 794
>gnl|LJGI|BW595772 similar to UniRef100_A7P7X8 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (53%)
Length = 490
Score = 801 bits (404), Expect = 0.0
Identities = 404/404 (100%)
Strand = Plus / Plus
Query: 122 tcagccgagacaatttgtgcaagaactgcaagaggccaggtcattttgctagagaatgcc 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87 tcagccgagacaatttgtgcaagaactgcaagaggccaggtcattttgctagagaatgcc 146
Query: 182 ctaatgttgctatttgccacaactgtggcctcccagggcacattgcttcagaatgcacca 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 ctaatgttgctatttgccacaactgtggcctcccagggcacattgcttcagaatgcacca 206
Query: 242 caaagtcgctgtgctggaattgtaaggaacctggccacatggcaagcagttgtccaaatg 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 caaagtcgctgtgctggaattgtaaggaacctggccacatggcaagcagttgtccaaatg 266
Query: 302 agggcatttgccacacctgtggcaaagttggacaccgtgctagggagtgctcagctcctc 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 agggcatttgccacacctgtggcaaagttggacaccgtgctagggagtgctcagctcctc 326
Query: 362 ctatgcctccaggggacttgaggttgtgcaacaactgttataagcagggccatattgcag 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ctatgcctccaggggacttgaggttgtgcaacaactgttataagcagggccatattgcag 386
Query: 422 ttgaatgtactaatgagaaggcgtgcaacaactgtaggaagacaggtcacctcgcacgtg 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 ttgaatgtactaatgagaaggcgtgcaacaactgtaggaagacaggtcacctcgcacgtg 446
Query: 482 attgtccaaatgatcccatctgcaacttgtgcaatgtttctggg 525
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 attgtccaaatgatcccatctgcaacttgtgcaatgtttctggg 490
>gnl|LJGI|BW622142 similar to UniRef100_A7P7X8 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (27%)
Length = 488
Score = 438 bits (221), Expect = e-122
Identities = 221/221 (100%)
Strand = Plus / Plus
Query: 1 atgagttcagacagccgcagccgaagcagaagcaggagcaggagcccaatggaccgtaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 atgagttcagacagccgcagccgaagcagaagcaggagcaggagcccaatggaccgtaag 327
Query: 61 atccggtctgaccgattctcctatcgtgatgcaccttacaggagagattcacgtcggggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 atccggtctgaccgattctcctatcgtgatgcaccttacaggagagattcacgtcggggt 387
Query: 121 ttcagccgagacaatttgtgcaagaactgcaagaggccaggtcattttgctagagaatgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 ttcagccgagacaatttgtgcaagaactgcaagaggccaggtcattttgctagagaatgc 447
Query: 181 cctaatgttgctatttgccacaactgtggcctcccagggca 221
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 cctaatgttgctatttgccacaactgtggcctcccagggca 488
>gnl|LJGI|TC77578 similar to UniRef100_A7P7X8 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 435
Score = 289 bits (146), Expect = 1e-77
Identities = 146/146 (100%)
Strand = Plus / Plus
Query: 647 actgccagcaactgggtcacatgagcagggattgcatgggaccattgatgatctgtcaca 706
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 actgccagcaactgggtcacatgagcagggattgcatgggaccattgatgatctgtcaca 60
Query: 707 attgtggaggtcgtggtcacctggcctatgagtgcccttctggtcggtttatggatcgct 766
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 attgtggaggtcgtggtcacctggcctatgagtgcccttctggtcggtttatggatcgct 120
Query: 767 atgcaccaaacacaaggaggtactga 792
||||||||||||||||||||||||||
Sbjct: 121 atgcaccaaacacaaggaggtactga 146